Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq2 138 2e-27
>seq2
Length=2890200
Score = 138 bits (152), Expect = 2e-27
Identities = 695/1086 (64%), Gaps = 61/1086 (6%)
Strand=Plus/Minus
Query 279331 AGGAGACTGAGCCAGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGA 279390
||||| |||| ||||||||||| || |||| || ||||||||||| ||||||| |
Sbjct 2626668 AGGAGGATGAGGAGGGTGAGGATCTCTGCAACTGCGAGTTCTCGCTCGCCTATGGTGCTA 2626609
Query 279391 AGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAAC---CGGTATGGTCTCA 279447
|||||||||| ||| ||| | | | |||||| ||||| || || || |
Sbjct 2626608 AGATTCTGCTGAACCGTACTCAGATGCGCCTCAAGC---GCAACCGTCGATACGGCTTGT 2626552
Query 279448 TCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGG 279507
|| ||||| || || |||||| |||||| ||||| |||||||| | || ||| | |
Sbjct 2626551 GTGGACCCAACGGTGCTGGTAAGTCCACTCTTATGCGTGCCATTGCTGAGGGCCAGGTTG 2626492
Query 279508 AAGGATTTCCTAACGCATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCT 279567
| || || || |||| ||| | | ||| || ||||| ||||| || || ||
Sbjct 2626491 AGGGCTTCCCCAACG---ACGAGCTCAAGACTGTCTATGTTGAGCATGATATTGATGGAA 2626435
Query 279568 CTCTCTCGGATAGCACTGTGTTCGACTTCCTAACGTC-TGA-CAAT----CAGGTTATGG 279621
||| ||| || | || || | |||| ||||| ||| || | ||| | ||
Sbjct 2626434 CTCACTCCGACACCAACGTTCTTGACT-----ACGTCATGATCACTGCTGCAGATGCTG- 2626381
Query 279622 AAATCAGCTCTCCTGAGGAAATCATCCAGAAACTGGAGGCCAAT--GGTTTTGATGAAAG 279679
|| || | ||||| | | || || | | ||| || ||| |||
Sbjct 2626380 ---TCGGCCCCAAGGAGGAGGTTCACGCCAAGCTCAA--CGAATTCGGCTTTACTGACGA 2626326
Query 279680 AATGCGTAATCTGCCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCT--- 279736
||| | | |||| | ||||| || |||||||||||||||||||| || ||
Sbjct 2626325 GATGTGCGCTATGCCTATCACCTCTCTTTCTGGTGGTTGGAAGATGAAGCTTGCTCTTGC 2626266
Query 279737 CACTCGCGCCATTCTACTGCGT---GCCGATGTCCTACTGCTTGATGAGCCAACCAACCA 279793
|||| || | | || ||| || ||| | | || | |||||||| || |||||
Sbjct 2626265 CACT-GC-----TGTGCTTCGTAAGGCTGATATTTTGCTTTTGGATGAGCCTACAAACCA 2626212
Query 279794 CATGGACACCACCAACGTAGCCTGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTC 279853
| |||| || |||||| |||||| | || |||||| | || | || | | || |
Sbjct 2626211 CTTGGATACTGTCAACGTCGCCTGGTTGGTCAACTACCTCAACACT-TGTGG--TATTAC 2626155
Query 279854 TTCCCTCATTGTCTCTCACGACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCA 279913
||| ||||||| || |||||||| |||||| | || || | |||||| |
Sbjct 2626154 CTCCATCATTGTGTCCCACGACTCCGGCTTCTTGGACAAGGTCACCCAGTACATCATCAA 2626095
Query 279914 CTATGAGCAAAATCTGAAGCTCTCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAA 279973
|| | || || | |||||| |||| ||||||||||||| | | || || ||
Sbjct 2626094 CT---ACCAGAACTTCAAGCTCCACAAGTACATCGGCAACCTTACAGAGTTTGTCAAGAA 2626038
Query 279974 GCGCCCTGAGGCGGCC---GCCTACTATGACCTGAAGGACGCCACCGCCAAGTGGGAATT 280030
| ||| | | ||| | |||| || || | | || | || | || ||
Sbjct 2626037 GTACCC---GCCTGCCAAATCTTACTTCGAGCTTGGTGCCTCCGAGGTTAACTTCGATTT 2625981
Query 280031 CCCTGAGCCAGGGTTTCTGGAGGGCATCACATCAAAGGATCGCGCAATCATGAAGCTCCG 280090
||||||||| || || || ||||| ||| | ||| | || ||| | ||| |
Sbjct 2625980 CCCTGAGCCTGGTTTCCTCGAGGGTGTCAAGACCAAGCAGAAGGCTATCGTCAAGGTTTC 2625921
Query 280091 TGGCGTCTCCTTTGCTTATCCCAATGGCCCCAACATCTTCAG--CAGTGTCAACTC---G 280145
| ||| | || || |||| || | | | | ||| || | | |||
Sbjct 2625920 TAATGTCACATTCCAGTA-CCCAGGTACCTCGA-AGCCACAGATCACGGATATCTCATTC 2625863
Query 280146 CAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACC 280205
||| ||| | ||| || |||| ||||||||| ||||| ||||| |||||||||||
Sbjct 2625862 CAGTGCTCTCTCTCCTCCCGTATTGCTGTCATTGGCCCCAACGGTGCCGGTAAGTCTACT 2625803
Query 280206 CTAATCAAAGTCCTGACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCC 280265
||||| || ||||| ||||| ||| | | || | || || | | ||
Sbjct 2625802 CTAATTAACGTCCTCACTGGTGAGCTTTTGCCTACCAATGGTGAGGTCTACACTCACGAG 2625743
Query 280266 AACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGAC 280325
||| || || || |||||| |||||||| ||| ||||||||| |||||| |||||
Sbjct 2625742 AACTGCCGTATCGCCTACGTCAAGCAGCACGCATTCGCCCACATCGATAACCACTTGGAC 2625683
Query 280326 ATGACTCCTAACCAATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGT 280384
| |||||||| | | ||||| |||||||| | | || | ||| |||| | ||| | |
Sbjct 2625682 AAGACTCCTAGCGAGTACATCCAGTGGCG-TTTCCAGACTGGTGAGGACCGCGAGACCAT 2625624
Query 280385 GGATCG 280390
||||||
Sbjct 2625623 GGATCG 2625618
Score = 105 bits (116), Expect = 1e-17
Identities = 122/162 (75%), Gaps = 2/162 (1%)
Strand=Plus/Minus
Query 280678 TGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGA 280737
||||||| || | ||||| | |||||||| || |||||||||||||| ||||| |
Sbjct 2625285 TGGGTCTTGAGGCTGAGTTGGTCTCCCACTCTCGTATCCGCGGTCTTTCTGGTGGCCAAA 2625226
Query 280738 AGGTCAAACTTGTCATCGGAG-CAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGAC 280796
||||||| |||||| | | | | || | ||||| | |||||| ||||||| |||||
Sbjct 2625225 AGGTCAAGCTTGTCTTGGCTGCCTGCAC-ATGGCAGCGTCCTCACTTGATCGTCCTCGAT 2625167
Query 280797 GAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838
|||||||| ||||| ||||||| || ||||| || |||
Sbjct 2625166 GAGCCTACTAACTACTTGGACCGTGACTCTCTGGGTGCCCTG 2625125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836589293456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |