Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1 183 6e-41
seq3 165 2e-35
seq2 131 3e-25
>seq1
Length=2987201
Score = 183 bits (202), Expect = 6e-41
Identities = 179/228 (79%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || |||||||| | |||||||| ||||||||||| || |||||||| || || |||
Sbjct 2570402 CCACCACGAAGGCGAAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAG 2570343
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| || || | || ||||| || |||
Sbjct 2570342 AGGGTGCGGCCATCGTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGA 2570283
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
|||||||||||||| ||||| ||| || |||||||| ||||| ||| || || ||
Sbjct 2570282 ATGCCTTCCTTGTCGCTGATCTTGCTCTTCACAGCCTCGATCGTGTC-GCTAGACTCGAC 2570224
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || |||||||||||||||| ||| ||||||||
Sbjct 2570223 CTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGATGAAGATCTGCAT 2570176
>seq3
Length=2072284
Score = 165 bits (182), Expect = 2e-35
Identities = 178/233 (76%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 68230 AATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAAT 68289
|||| || || || || || | ||||| || || |||||||| ||||||||||| || |
Sbjct 540879 AATTGCCGCCACGGAGACGTAGAACCAAATGCAGAGTGGACTCCTTTTGGATGTTGTAGT 540820
Query 68290 CGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGG 68349
|||| || || | ||||| || | |||||| || || || ||||| | |||||||| |
Sbjct 540819 CGGAAAGAGTACGACCATCGTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAG 540760
Query 68350 GTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GAT 68408
| ||||| ||||||||||| ||||| |||||| ||||| |||||||| ||| ||
Sbjct 540759 GGGGAATTCCTTCCTTGTCAGAGATCTTACTCTTGACAGCCTCAATGGTGTC-GCTAGAC 540701
Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||||| | || ||||| || ||||| | ||||||| ||| ||||||||
Sbjct 540700 TCTACTTCTAGCGTAATGGTCTTGCCCGTTAACGTCTTGATGAAAATCTGCAT 540648
>seq2
Length=2890200
Score = 131 bits (144), Expect = 3e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| || || ||||| || || ||||| || |||||
Sbjct 724323 CCACCACGGAGACGGAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAA 724382
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| || || | || ||||| || ||
Sbjct 724383 AGGGTGCGGCCATCATCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGG 724442
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||| || ||||| ||| || |||||||||||||| || || ||
Sbjct 724443 ATGCCCTCCTTATCGCTGATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCACC 724502
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||| || || || ||||| ||||| || | ||| ||||||||
Sbjct 724503 TCGAGGGTAATAGTCTTACCCGTCAGGGTTTTAATGAAGATCTGCAT 724549
Score = 123 bits (136), Expect = 5e-23
Identities = 663/1039 (64%), Gaps = 39/1039 (4%)
Strand=Plus/Plus
Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040
|||||||||||||||| | | || ||| |||||| |||||| || || ||| ||| ||
Sbjct 2625654 CGCCACTGGATGTACTCGCTAGGAGTCTTGTCCAAGTGGTTATCGATGTGGGCGAATGCG 2625713
Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100
||||| ||||| || || || ||| || | | || || || ||
Sbjct 2625714 TGCTGCTTGACGTAGGCGATACGGCAGTTCTCGTGAGTGTAGACCTCACCATTGGTAGGC 2625773
Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160
||| || |||||||| || || || |||| ||| || ||||| |||||||||||
Sbjct 2625774 AAAAGCTCACCAGTGAGGACGTTAATTAGAGTAGACTTACCGGCACCGTTGGGGCCAATG 2625833
Query 225161 ACGCCAATCCGGGATGA-------CATTGCAACCTGCGAGTTCACGTTG-CTGAAGATCT 225212
|| |||| ||||| || || || || || || || ||| ||| | |
Sbjct 2625834 ACAGCAATACGGGAGGAGAGAGAGCACTGGAA--TGAGATATC-CGTGATCTGTGGCTTC 2625890
Query 225213 CAGGGCCAGTTTGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTTGG 225272
||| | | |||| || | || | | ||| | ||| || | |||||
Sbjct 2625891 GAGGTACC--TGGGTACTGGAATGTGACATTAGAAACCTTGACGATAGCCTTCTGCTTGG 2625948
Query 225273 AAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTTCA 225332
| | |||||| ||||| || ||||| ||||| || | || | | | | | |
Sbjct 2625949 TCTTGACACCCTCGAGGAAACCAGGCTCAGGGAAATCGAAGTTAACCTCGGAGGCACCAA 2626008
Query 225333 GGTCGTAGTAAGAT---GCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGA 225389
| ||| |||||||| |||| | |||| ||| || || | | ||||| ||||
Sbjct 2626009 GCTCGAAGTAAGATTTGGCAGGC--GGGTA-CTTCTTGACAAACTCTGTAAGGTTGCCGA 2626065
Query 225390 GGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCAA 225449
|| ||| |||||||| ||||| | || ||| | | | | | || ||| |
Sbjct 2626066 TGTACTTGTGGAGCTTGAAGTTCTGGTAGT--TGATGATGTACTGGGTGACCTT-GTCCA 2626122
Query 225450 GGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCG 225509
|||||| ||||||||||||||||||||||| | | | | || | |||||||
Sbjct 2626123 AGAAGCCGGAGTCGTGGGACACAATGATGGAGGTAA--TACCACAAGTG-TTGAGGTAGT 2626179
Query 225510 TGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGA 225569
||| | ||| || |||||| |||| |||||||||||| || |||| ||||| |
Sbjct 2626180 TGACCAACCAGGCGACGTTGACAGTATCCAAGTGGTTTGTAGGCTCATCCAAAAGCAAAA 2626239
Query 225570 TGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACA 225629
| ||||| | | || | || | |||| |||||||| ||||| || || || |
Sbjct 2626240 TATCAGCCTTACGAAGCACAGCAGTGGCAAGAGCAAGCTTCATCTTCCAACCACCAGAAA 2626299
Query 225630 GGGAGCCGATTGAAACAGAGTGCTTAGCTTCGTCA---AAGCCGTACTCCAGGAGCGTCT 225686
| ||| ||| | || || || | || ||||| |||||| | || |||| |
Sbjct 2626300 GAGAGGTGATAGG--CATAGCGCACATCT-CGTCAGTAAAGCCGAATTCGTTGAGCTTGG 2626356
Query 225687 GGATAATGCGCTCGGGAGAGCTGCGAGCGGCAAC-GTTGGGGTCGGACGAGAGGTAATCA 225745
| || ||| | || ||| | ||| | | | || | | || ||| |||
Sbjct 2626357 CGTGAACCTCCTCCTTGGGGC--CGA-CAGCATCTGCAGCAGT-GATCATGACGTAGTCA 2626412
Query 225746 TATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGC 225805
||| | |||| ||| || | ||||| || || || || || || ||| ||||
Sbjct 2626413 AGAACGTTGGTGTCGGAGTGAGTTCCATCAATATCATGCTCAACATAGACAGTCTTGAGC 2626472
Query 225806 TGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTC 225865
| | | |||||||||||| | |||||| | ||||| ||||| | || || |
Sbjct 2626473 TCGT---CGTTGGGGAAGCCCTCAACCTGGCCCTCAGCAATGGCACGCATAAGAGTGGAC 2626529
Query 225866 TTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGC 225925
|| || || |||||||| || | |||||| || |||||||| | | |
Sbjct 2626530 TTACCAGCACCGTTGGGTCCACACAAGCCGTATCGACGGTTGCGCTTGAGGCGCATCTGA 2626589
Query 225926 GTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCC 225985
|| |||||| || ||||| |||||||||| || ||||||||||| | ||| || |||
Sbjct 2626590 GTACGGTTCAGCAGAATCTTAGCACCATAGGCGAGCGAGAACTCGCAGTTGCAGAGATCC 2626649
Query 225986 TCACCCTCCTCGGTCTCCT 226004
||||||||||| |||||
Sbjct 2626650 TCACCCTCCTCATCCTCCT 2626668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622215675520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |