Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq3 123 2e-23 seq2 82.4 6e-11 >seq3 Length=2072284 Score = 123 bits (136), Expect = 2e-23 Identities = 167/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 114150 CAAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAA 114209 ||| | |||||||| || | | ||| ||||| | || || || ||||| |||||||| Sbjct 540880 CAATTGCCGCCACGGAGACGTAGAACCAAATGCAGAGTGGACTCCTTTTGGATGTTGTAG 540821 Query 114210 TCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCC 114269 ||| | ||||||| ||| ||||| || || ||||| ||||||||||||||||||| Sbjct 540820 TCGGAAAGAGTACGACCATCGTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCA 540761 Query 114270 GGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGAT 114329 || ||||| ||||| ||||| | ||||| || | |||| ||||||| | || Sbjct 540760 GGGGGAATTCCTTCCTTGTCAGAGATCTTACTCTTGACAGCCTCAATGGTGTCGCTAGAC 540701 Query 114330 TCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || | || | || ||||| || | || || | ||||||||||| Sbjct 540700 TCTACTTCTAGCGTAATGGTCTTGCCCGTTAACGTCTTGATGAAAATCTGCAT 540648 >seq2 Length=2890200 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | || || || | ||||| || || ||||||||||| ||| Sbjct 724322 ACCACCACGGAGACGGAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGA 724381 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || || ||| ||||| || || || ||| |||| |||||||| ||||| || || Sbjct 724382 AAGGGTGCGGCCATCATCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGG 724441 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||||| || || ||| ||||| || | || | |||||| | || || || Sbjct 724442 GATGCCCTCCTTATCGCTGATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCAC 724501 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | || || || ||||| ||||| | || |||||||| Sbjct 724502 CTCGAGGGTAATAGTCTTACCCGTCAGGGTTTTAATGAAGATCTGCAT 724549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134318073792