Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1 147 4e-30 >seq1 Length=2987201 Score = 147 bits (162), Expect = 4e-30 Identities = 363/542 (67%), Gaps = 13/542 (2%) Strand=Plus/Plus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 |||||||| ||||| || || |||| ||| |||||||| | ||||| || Sbjct 896775 CTGTTCAACGCCATCTTCACCATTCCCTCCATTCGCAAGAAGGCTAAGTGGGCACTTCGT 896834 Query 42669 TGGATCGAGAGTCCC-GACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGA 42727 |||||| || | | | || | || |||| ||| | || | ||||| | || || || Sbjct 896835 TGGATC-AGCGACGCTGAGTCTACCTTCGCAGAGCGCCTAATTGCCTTCGCTGCTGTTGA 896893 Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGAT 42787 || |||||||| ||| | || || || ||||||||||| || || | | || Sbjct 896894 AGGTGTCTTCTTCAGTGGCTCGTTTGCATCAATCTTCTGGCTGAAAAAGCGTGGGCTCAT 896953 Query 42788 GCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTT 42847 ||| || || || ||||| |||||||| || | || ||||| |||| | || || Sbjct 896954 GCCTGGGCTTACTTTCTCCAACGAACTGATTTCGCGCGATGAGGGTATGCACACCGATTT 897013 Query 42848 TGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA--GCCCTCGAAG-GAGCGGGTCCG 42904 |||||| ||||| ||| |||||| | ||| || ||||| | | | || Sbjct 897014 TGCCTGTCTCCTATTC---AGCCACTT---GCAGAACCGCCCTAGCCGTGCTATCGTTGA 897067 Query 42905 GGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGT-CGCTGCCCG 42963 | |||||||| || ||||| || || ||| | || | | || ||| | | |||| | Sbjct 897068 GAGAATCATCACTGAAGCCGTCGACATTGAGCAAGAATACTTC-CGCGATGCTTTGCCTG 897126 Query 42964 TGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACC 43023 | || ||||||||||| |||||||||| | | || || ||| ||||||||||| Sbjct 897127 TAAGTCTTCTCGGCATGAACGCCGACCTCATGAACCAATATGTCGAGTTCGTCGCCGACC 897186 Query 43024 ATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTA 43083 | | |||| |||| | || ||| ||||||| | | || || ||||||| Sbjct 897187 GTTTGCTGTTGGCTTTGGGCCACAAGCGCGTCTACAATGTGACCAATCCGTTTGACTTTA 897246 Query 43084 TGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACC 43143 ||||||||||||| | | || |||||||| || || ||||| || || | ||||||| Sbjct 897247 TGGAGAACATCTCTCTTGCTGGAAAGACCAATTTCTTTGAGAAACGTGTTTCAGACTACC 897306 Query 43144 AG 43145 || Sbjct 897307 AG 897308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339011132160