Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 3e-17
seq2 102 9e-17
>seq1
Length=2987201
Score = 104 bits (114), Expect = 3e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058
|||||| || | ||| |||||| || || ||||| |||| || || || | || ||
Sbjct 2570385 CACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCGTC 2570326
Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118
|||||||| || ||||| || || ||||||||||| | || | || |||||||| |
Sbjct 2570325 GAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCGCT 2570266
Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178
||| || || | | | | | ||||||||| || || || || | ||||| || ||
Sbjct 2570265 GATCTTGCTCTTCACAGCCTCGATCGTGTCGCTAGACTCGACCTCAAGGGTGATAGTCTT 2570206
Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| || ||||| | ||||| |||||
Sbjct 2570205 CCCCGTGAGGGTCTTGATGAAGATCTGCAT 2570176
>seq2
Length=2890200
Score = 102 bits (112), Expect = 9e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| || | || |||||| ||||| ||||| || | || || || |
Sbjct 724334 ACGGAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCC 724393
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||||| |||||||| || ||||| || || ||||||||||| | || | || ||||||
Sbjct 724394 ATCATCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTT 724453
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
|| |||| || || | | | | | ||||| ||||| ||||| |||| || ||
Sbjct 724454 ATCGCTGATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAAT 724513
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || ||||| || || || | ||||| |||||
Sbjct 724514 AGTCTTACCCGTCAGGGTTTTAATGAAGATCTGCAT 724549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212691357440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |