Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq3 109 5e-19 seq2 98.7 1e-15 seq1 87.8 2e-12 >seq3 Length=2072284 Score = 109 bits (120), Expect = 5e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || ||||| |||||||| || | | || || | || |||||||||||||| Sbjct 540844 GTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGACCATCGTCAAGCTGCTTGCCA 540785 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||| ||||| ||||| || ||||||||||| || || || || ||| Sbjct 540784 GCAAAGATGAGACGCTGTTGGTCAGGGGGAATTCCTTCCTTGTCAGAGATCTTACTCTTG 540725 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| |||| | || || | | || ||||||| || | ||||||||| || || || Sbjct 540724 ACAGCCTCAATGGTGTCGCTAGACTCTACTTCTAGCGTAATGGTCTTGCCCGTTAACGTC 540665 Query 64427 TTTACGAAAATTTGCATTTT 64446 || | |||||| ||||| || Sbjct 540664 TTGATGAAAATCTGCATCTT 540645 >seq2 Length=2890200 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | |||| || || || || ||||||||||| || | | |||||| | || Sbjct 724338 AGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCA 724397 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||||||||| | || || ||||||||||| || || || || || || || Sbjct 724398 TCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCG 724457 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || ||| ||| |||| | || |||| | ||||| || | || | ||| Sbjct 724458 CTGATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAATAGTC 724517 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || |||| ||||| | ||| || ||||| Sbjct 724518 TTACCCGTCAGGGTTTTAATGAAGATCTGCAT 724549 >seq1 Length=2987201 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| | || | ||| || || || || |||||||| || | || |||||| | || Sbjct 2570388 AAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 2570329 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || |||||||||||||| | || || ||||||||||| || ||||| ||||| || || Sbjct 2570328 GTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCCTTCCTTGTC 2570269 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || ||| ||| |||| | || || | | || || || | || | || Sbjct 2570268 GCTGATCTTGCTCTTCACAGCCTCGATCGTGTCGCTAGACTCGACCTCAAGGGTGATAGT 2570209 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || || | || || | ||| || ||||| Sbjct 2570208 CTTCCCCGTGAGGGTCTTGATGAAGATCTGCAT 2570176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644700071040