Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1 201 1e-46 >seq1 Length=2987201 Score = 201 bits (222), Expect = 1e-46 Identities = 603/932 (65%), Gaps = 24/932 (3%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 |||||| | || |||| |||||||| || ||| || ||| | || || | |||| Sbjct 1206089 AATTACAACTATTTTGGTTTCAAAACGCTAGAGCGCTCCTACTTGCTGAAACTAAATGGA 1206148 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| |||||| || || || || | ||||||||| |||| || ||||| ||| | Sbjct 1206149 AAAGTTCACGAGCGCCCTCAGCATATGATCATGCGCGTCTCCATTGGTATTCATGGCGAT 1206208 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||||| || || || | | ||| || ||| |||| | ||| ||| Sbjct 1206209 GACATACCCAAAGTCGTAGAGACTTACAACCTTATGTCCAACAAATACTTCACCCACGCC 1206268 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | || ||| ||| ||| || || || || ||| |||||| ||||| ||||| | Sbjct 1206269 TCGCCCACCTTGTACAATGCAGGAACTCCAAAGCCTCAGATGAGCTCGTGCTTCCTCGTA 1206328 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 | | |||| ||| || || || |||| ||| | || ||| ||| ||| |||| Sbjct 1206329 AACATGAAGGACGATTCTATTGAGGGTATTTACGATACTCTGAAGAGCTGCGCGCTCATC 1206388 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || | || || || || ||| ||||||| || || | || || | || || || Sbjct 1206389 TCGAAGTCTGCCGGTGGGATTGGGCTCAGTGTGCATAACATCCGCGCTACTGGCTCATAT 1206448 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 || ||||| || || ||||| || || | | || ||| | || || | ||||||| Sbjct 1206449 ATAGCTGGTACGAACGGAACCTCGAATGGGATTCTTCCCATGTTGCGTGTGTACAACAAC 1206508 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || || ||||| ||||| ||||| | | | ||| | || || |||| ||| Sbjct 1206509 ACTGCTCGTTACGTCGACCAAGGTGGGAACAAGCGTCCTGGTGCCTTTGCCATCTACCTC 1206568 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| ||||| | || ||| | || ||||||||||| || || |||||||| || Sbjct 1206569 GAGCCGTGGCATGACGATGTGTTCGACTTTATCGACCTGCGCAAAAATCACGGCAAGGA- 1206627 Query 94255 CTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 |||| | || | || || ||| || || ||| | || || || || ||||| Sbjct 1206628 --AGAGATTCGCGCACGCGATCTTTTCATGGCCCTTTGGATTCCCGATCTGTTCATGAAG 1206685 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 |||||| | | | | |||| ||| | || ||||| ||||| || || || | Sbjct 1206686 CGCGTCAAAGCGGATGCTGATTGGACACTTATGTGCCCCAACGAATGCCCTGGCCTTGCT 1206745 Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431 ||||||| ||| || || || | |||| |||||| | | | ||||| Sbjct 1206746 GACGTTTACGGA---------GATGAATTTGAGGCTCTTTACGAGAAGTATGAAAAGGCT 1206796 Query 94432 AGGAAGG---------TTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAG 94482 | |||| || | ||| |||||| ||| | || | || | ||| Sbjct 1206797 GGAAAGGGCCGTCGTACCATAAAGGCTCAGAAGCTTTGGTACGCTATTCTTGAGGCTCAG 1206856 Query 94483 GTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAG 94542 ||||| |||| |||| ||| | | |||||| ||| |||| |||| ||||||| Sbjct 1206857 ACCGAGACTGGTAACCCCTTCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAG 1206916 Query 94543 CAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCT 94602 || | || || ||||||||||| ||| |||| ||| ||||| |||||| | || Sbjct 1206917 AAGAATCTTGGAACCATCAAGAGCTCCAATTTGTGTTGCGAAATTGTTGAGTATTCATCC 1206976 Query 94603 CCGGACGAGATTGCTGTGTGTAACCTGGGCTC 94634 || || |||| ||||||||| ||||| | ||| Sbjct 1206977 CCTGAGGAGACTGCTGTGTGCAACCTTGCCTC 1207008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723101055360