Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq1 201 1e-46
>seq1
Length=2987201
Score = 201 bits (222), Expect = 1e-46
Identities = 603/932 (65%), Gaps = 24/932 (3%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|||||| | || |||| |||||||| || ||| || ||| | || || | ||||
Sbjct 1206089 AATTACAACTATTTTGGTTTCAAAACGCTAGAGCGCTCCTACTTGCTGAAACTAAATGGA 1206148
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| ||| |||||| || || || || | ||||||||| |||| || ||||| ||| |
Sbjct 1206149 AAAGTTCACGAGCGCCCTCAGCATATGATCATGCGCGTCTCCATTGGTATTCATGGCGAT 1206208
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
||||| || || || | | ||| || ||| |||| | ||| |||
Sbjct 1206209 GACATACCCAAAGTCGTAGAGACTTACAACCTTATGTCCAACAAATACTTCACCCACGCC 1206268
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954
| || ||| ||| ||| || || || || ||| |||||| ||||| ||||| |
Sbjct 1206269 TCGCCCACCTTGTACAATGCAGGAACTCCAAAGCCTCAGATGAGCTCGTGCTTCCTCGTA 1206328
Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014
| | |||| ||| || || || |||| ||| | || ||| ||| ||| ||||
Sbjct 1206329 AACATGAAGGACGATTCTATTGAGGGTATTTACGATACTCTGAAGAGCTGCGCGCTCATC 1206388
Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074
|| || | || || || || ||| ||||||| || || | || || | || || ||
Sbjct 1206389 TCGAAGTCTGCCGGTGGGATTGGGCTCAGTGTGCATAACATCCGCGCTACTGGCTCATAT 1206448
Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134
|| ||||| || || ||||| || || | | || ||| | || || | |||||||
Sbjct 1206449 ATAGCTGGTACGAACGGAACCTCGAATGGGATTCTTCCCATGTTGCGTGTGTACAACAAC 1206508
Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194
| || || ||||| ||||| ||||| | | | ||| | || || |||| |||
Sbjct 1206509 ACTGCTCGTTACGTCGACCAAGGTGGGAACAAGCGTCCTGGTGCCTTTGCCATCTACCTC 1206568
Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254
||||| ||||| | || ||| | || ||||||||||| || || |||||||| ||
Sbjct 1206569 GAGCCGTGGCATGACGATGTGTTCGACTTTATCGACCTGCGCAAAAATCACGGCAAGGA- 1206627
Query 94255 CTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|||| | || | || || ||| || || ||| | || || || || |||||
Sbjct 1206628 --AGAGATTCGCGCACGCGATCTTTTCATGGCCCTTTGGATTCCCGATCTGTTCATGAAG 1206685
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371
|||||| | | | | |||| ||| | || ||||| ||||| || || || |
Sbjct 1206686 CGCGTCAAAGCGGATGCTGATTGGACACTTATGTGCCCCAACGAATGCCCTGGCCTTGCT 1206745
Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431
||||||| ||| || || || | |||| |||||| | | | |||||
Sbjct 1206746 GACGTTTACGGA---------GATGAATTTGAGGCTCTTTACGAGAAGTATGAAAAGGCT 1206796
Query 94432 AGGAAGG---------TTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAG 94482
| |||| || | ||| |||||| ||| | || | || | |||
Sbjct 1206797 GGAAAGGGCCGTCGTACCATAAAGGCTCAGAAGCTTTGGTACGCTATTCTTGAGGCTCAG 1206856
Query 94483 GTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAG 94542
||||| |||| |||| ||| | | |||||| ||| |||| |||| |||||||
Sbjct 1206857 ACCGAGACTGGTAACCCCTTCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAG 1206916
Query 94543 CAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCT 94602
|| | || || ||||||||||| ||| |||| ||| ||||| |||||| | ||
Sbjct 1206917 AAGAATCTTGGAACCATCAAGAGCTCCAATTTGTGTTGCGAAATTGTTGAGTATTCATCC 1206976
Query 94603 CCGGACGAGATTGCTGTGTGTAACCTGGGCTC 94634
|| || |||| ||||||||| ||||| | |||
Sbjct 1206977 CCTGAGGAGACTGCTGTGTGCAACCTTGCCTC 1207008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494723101055360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |