Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3 105 7e-18 seq2 98.7 1e-15 >seq3 Length=2072284 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| || | ||| | ||| ||||| | | ||||||||||| |||||||||||| Sbjct 540875 GCCGCCACGGAGACGTAGAACCAAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGA 540816 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | |||||| || || || || || || | | |||| |||||||||||||| || || Sbjct 540815 AAGAGTACGACCATCGTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGG 540756 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| | ||| || || | || | ||||||| | ||||| || Sbjct 540755 AATTCCTTCCTTGTCAGAGATCTTACTCTTGACAGCCTCAATGGTGTCGCTAGACTCTAC 540696 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | ||| | || || || || | || || | ||||||||||| Sbjct 540695 TTCTAGCGTAATGGTCTTGCCCGTTAACGTCTTGATGAAAATCTGCAT 540648 >seq2 Length=2890200 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||||||| | || || || || || || || |||| Sbjct 724356 GACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCATCAAGCTGCTTGCCGGCG 724415 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| || || || || || || ||| |||| || || | Sbjct 724416 AAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCGCTGATCTTGCTCTTCACA 724475 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || | |||||| ||||||||||||||| || | || ||||| ||||| ||||| Sbjct 724476 GCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAATAGTCTTACCCGTCAGGGTTTTA 724535 Query 138601 ACAAAAATCTGCAT 138614 | || |||||||| Sbjct 724536 ATGAAGATCTGCAT 724549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262300747520