Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 1e-16
>seq1
Length=2987201
Score = 102 bits (112), Expect = 1e-16
Identities = 278/422 (66%), Gaps = 4/422 (1%)
Strand=Plus/Minus
Query 203884 CAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAG 203943
|||||||||||| |||||||| || || || ||| ||||| | |||||| | ||
Sbjct 1207891 CAGATAGTACATACCGGTCTTGAGCCCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAG 1207832
Query 203944 TTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGG 204003
|||| || ||||| ||| | ||||||||| ||| |||||||||||||||||
Sbjct 1207831 CTTGCCCATTGTGGGGGATTGCATATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGG 1207772
Query 204004 CGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAA 204063
| | | |||||||||| |||||| ||| || |||||||| || |||||| |
Sbjct 1207771 TCCTCTGCCAGCGGCCATATCGATAATCACCTTTTGACTGATCTCCCAAACTGTCTTGTA 1207712
Query 204064 CACGTCTCTGGTGTGTTGAGGCACATC-TTCCCACGTCC-TGATCGAGCCGTTGTCGGCC 204121
| |||| || || | ||| ||| | |||| | |||||||| |||
Sbjct 1207711 GAGGTCTTTGAGGTCATCAGG--AATCGAGGGAATGTCCTTAATCGAGCCCCCAGAGGCA 1207654
Query 204122 ATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGG 204181
| || | || || | || || ||| | ||||| || || ||| || ||
Sbjct 1207653 ACGAGACGGTTCTTCATGTCGTCGTTCCAAAGGCCCATTTCGACAAGGTCCTTCAAGAGA 1207594
Query 204182 TGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTG 204241
| || |||| ||||| || ||||||| || || | || | | | | || ||||
Sbjct 1207593 TAAGGATTGACAATCTGGAACTCTCCGGCGAGAACACGGCGCGAGTAGAAATTTGAGGTG 1207534
Query 204242 AATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGA 204301
|||| ||||| || |||| ||| |||||||||| ||| || || ||||| |||
Sbjct 1207533 TATGGCTCGAAGCATTCATTGTAGCCCAAAATCTGAGAGGTCGACGCGGTAGGCATCGGA 1207474
Query 204302 GC 204303
||
Sbjct 1207473 GC 1207472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795155040968960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |