Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1 102 1e-16 >seq1 Length=2987201 Score = 102 bits (112), Expect = 1e-16 Identities = 278/422 (66%), Gaps = 4/422 (1%) Strand=Plus/Minus Query 203884 CAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAG 203943 |||||||||||| |||||||| || || || ||| ||||| | |||||| | || Sbjct 1207891 CAGATAGTACATACCGGTCTTGAGCCCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAG 1207832 Query 203944 TTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGG 204003 |||| || ||||| ||| | ||||||||| ||| ||||||||||||||||| Sbjct 1207831 CTTGCCCATTGTGGGGGATTGCATATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGG 1207772 Query 204004 CGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAA 204063 | | | |||||||||| |||||| ||| || |||||||| || |||||| | Sbjct 1207771 TCCTCTGCCAGCGGCCATATCGATAATCACCTTTTGACTGATCTCCCAAACTGTCTTGTA 1207712 Query 204064 CACGTCTCTGGTGTGTTGAGGCACATC-TTCCCACGTCC-TGATCGAGCCGTTGTCGGCC 204121 | |||| || || | ||| ||| | |||| | |||||||| ||| Sbjct 1207711 GAGGTCTTTGAGGTCATCAGG--AATCGAGGGAATGTCCTTAATCGAGCCCCCAGAGGCA 1207654 Query 204122 ATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGG 204181 | || | || || | || || ||| | ||||| || || ||| || || Sbjct 1207653 ACGAGACGGTTCTTCATGTCGTCGTTCCAAAGGCCCATTTCGACAAGGTCCTTCAAGAGA 1207594 Query 204182 TGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTG 204241 | || |||| ||||| || ||||||| || || | || | | | | || |||| Sbjct 1207593 TAAGGATTGACAATCTGGAACTCTCCGGCGAGAACACGGCGCGAGTAGAAATTTGAGGTG 1207534 Query 204242 AATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGA 204301 |||| ||||| || |||| ||| |||||||||| ||| || || ||||| ||| Sbjct 1207533 TATGGCTCGAAGCATTCATTGTAGCCCAAAATCTGAGAGGTCGACGCGGTAGGCATCGGA 1207474 Query 204302 GC 204303 || Sbjct 1207473 GC 1207472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795155040968960