Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2 147 2e-30 seq1 143 3e-29 seq3 132 5e-26 >seq2 Length=2890200 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| || | ||| |||||| || || ||||||||||| || ||||| | Sbjct 724334 ACGGAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCC 724393 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||||||||| |||| ||||||||||| | ||| | || |||||| Sbjct 724394 ATCATCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTT 724453 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 || ||||||| |||| | | | | | ||||| ||||| ||||| || | || || Sbjct 724454 ATCGCTGATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAAT 724513 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||||||| ||||||| ||||| ||||| Sbjct 724514 AGTCTTACCCGTCAGGGTTTTAATGAAGATCTGCAT 724549 >seq1 Length=2987201 Score = 143 bits (158), Expect = 3e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| | ||||||||||||||||||||||| Sbjct 2570367 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCGTCGAGCTGCTTGCCGGCGAA 2570308 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | ||| | || |||||||| ||||||| |||| | | Sbjct 2570307 GATCAGACGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCGCTGATCTTGCTCTTCACAGC 2570248 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||||||| || || || || | ||||| || || ||||| || || || | Sbjct 2570247 CTCGATCGTGTCGCTAGACTCGACCTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGAT 2570188 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 2570187 GAAGATCTGCAT 2570176 >seq3 Length=2072284 Score = 132 bits (146), Expect = 5e-26 Identities = 174/240 (73%), Gaps = 1/240 (0%) Strand=Plus/Minus Query 46364 TTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCG 46423 ||||| || | | ||| | |||| ||||| || |||||||||||| ||||||||| Sbjct 540877 TTGCCGCCACGGAGACGTAGAACCAAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCG 540818 Query 46424 GATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCC 46483 || ||||| || | ||||| ||||||||||| || || || | ||||| ||||| | Sbjct 540817 GAAAGAGTACGACCATCGTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGG 540758 Query 46484 GGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCC 46543 || | | |||||||| |||||| |||||| | | | | |||||||| || || Sbjct 540757 GGAATTCCTTCCTTGTCAGAGATCTTACTCTTGACAGCCTCAATGGTGTCGCTAGACTCT 540698 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT-TTTGCACAA 46602 || || | ||| ||||| |||||||| | ||| || | || || ||||| ||||| ||| Sbjct 540697 ACTTCTAGCGTAATGGTCTTGCCCGTTAACGTCTTGATGAAAATCTGCATCTTTGCTCAA 540638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238286952320