Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq3 114 1e-19 >seq3 Length=2072284 Score = 114 bits (126), Expect = 1e-19 Identities = 299/454 (66%), Gaps = 4/454 (1%) Strand=Plus/Minus Query 517853 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 517912 ||||| || || ||||||| || | ||||| | ||| || || || || || || || Sbjct 233157 TCAATACCCTCATACAAAGAGTCGATCTCAATAGGAGTCTGGGTAGAGGAGGAGAGGGCG 233098 Query 517913 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCA 517970 || || ||||| || ||||| || || || | || | ||| |||| ||| | | | Sbjct 233097 CGCTTGGCACGCTCGCATGCAGTTCTCAGACGGCGGAGGGCAC--GCTGGTTGCCAGTAA 233040 Query 517971 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 518030 || | || || || | |||||| || | | | | || ||||| || || | Sbjct 233039 TGTCCTTCTTGTACTTGCGCTTGAACTCCTGGGCGAAGTGGTTGACCAGACGGTTGTCGA 232980 Query 518031 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 518090 |||| ||||| ||||| | ||| | || | || | | || | ||| | ||||| | Sbjct 232979 AATCCTCACCACCCAAGTGAGTGTCACCAGCGGTGGACTTGACCTCGAAGATACCATCGT 232920 Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 518150 ||| ||| | || ||||| ||| |||||||||| || || || || ||||| Sbjct 232919 CAATGCTCAACAAAGAGACATCGAAGGTACCACCACCCAAGTCGAAGATGAGGACATTAT 232860 Query 518151 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 518210 || || || ||||| || || |||| ||||| ||||| || || || | Sbjct 232859 GCTCACCAGAGCCCTTCTTGTCAAGGCCGTATGCAATGGCAGCCGCAGTGGGCTCGTTGA 232800 Query 518211 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 518270 |||| | | || || ||||||||||| |||| || || || ||||| || | || | Sbjct 232799 TAATACGAAGGACGTTGAGACCAGCAATGGTTCCGGCGTCCTTGGTGGCCTGACGCTGAG 232740 Query 518271 AATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 | ||||| || || ||||| ||||| || ||||| Sbjct 232739 AGTCGTTGAAGTAGGCAGGGACAGTGATGACGGC 232706 Score = 98.7 bits (108), Expect = 8e-15 Identities = 138/193 (72%), Gaps = 7/193 (4%) Strand=Plus/Minus Query 518117 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTT-----AT 518171 || ||||| |||| ||| |||||||| || | | | || | || ||| || | Sbjct 1756723 GTACCACCGCCCAAATCGAAAATAAGGACGTACTTCTCCTCCTC--GGTCTTACCAGCAC 1756666 Query 518172 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGAC 518231 ||||||| || |||| ||||||||| || || || || ||||| | | ||||| || | Sbjct 1756665 CAAGACCGTATGCAATAGCAGCAGCGGTAGGCTCGTTGATAATACGAAGGACATTGAGGC 1756606 Query 518232 CAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAA 518291 ||||||| || ||||| || ||||| || | ||| || ||||| || || ||||||| Sbjct 1756605 CAGCAATGGAGCCAGCATCCTTGGTGGCCTGACGTTGAGAGTCGTTGAAGTAGGCAGGAA 1756546 Query 518292 CAGTAATAACGGC 518304 |||| | ||||| Sbjct 1756545 CAGTGACGACGGC 1756533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780821606027296