Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq3 114 1e-19
>seq3
Length=2072284
Score = 114 bits (126), Expect = 1e-19
Identities = 299/454 (66%), Gaps = 4/454 (1%)
Strand=Plus/Minus
Query 517853 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 517912
||||| || || ||||||| || | ||||| | ||| || || || || || || ||
Sbjct 233157 TCAATACCCTCATACAAAGAGTCGATCTCAATAGGAGTCTGGGTAGAGGAGGAGAGGGCG 233098
Query 517913 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCA 517970
|| || ||||| || ||||| || || || | || | ||| |||| ||| | | |
Sbjct 233097 CGCTTGGCACGCTCGCATGCAGTTCTCAGACGGCGGAGGGCAC--GCTGGTTGCCAGTAA 233040
Query 517971 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 518030
|| | || || || | |||||| || | | | | || ||||| || || |
Sbjct 233039 TGTCCTTCTTGTACTTGCGCTTGAACTCCTGGGCGAAGTGGTTGACCAGACGGTTGTCGA 232980
Query 518031 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 518090
|||| ||||| ||||| | ||| | || | || | | || | ||| | ||||| |
Sbjct 232979 AATCCTCACCACCCAAGTGAGTGTCACCAGCGGTGGACTTGACCTCGAAGATACCATCGT 232920
Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 518150
||| ||| | || ||||| ||| |||||||||| || || || || |||||
Sbjct 232919 CAATGCTCAACAAAGAGACATCGAAGGTACCACCACCCAAGTCGAAGATGAGGACATTAT 232860
Query 518151 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 518210
|| || || ||||| || || |||| ||||| ||||| || || || |
Sbjct 232859 GCTCACCAGAGCCCTTCTTGTCAAGGCCGTATGCAATGGCAGCCGCAGTGGGCTCGTTGA 232800
Query 518211 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 518270
|||| | | || || ||||||||||| |||| || || || ||||| || | || |
Sbjct 232799 TAATACGAAGGACGTTGAGACCAGCAATGGTTCCGGCGTCCTTGGTGGCCTGACGCTGAG 232740
Query 518271 AATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304
| ||||| || || ||||| ||||| || |||||
Sbjct 232739 AGTCGTTGAAGTAGGCAGGGACAGTGATGACGGC 232706
Score = 98.7 bits (108), Expect = 8e-15
Identities = 138/193 (72%), Gaps = 7/193 (4%)
Strand=Plus/Minus
Query 518117 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTT-----AT 518171
|| ||||| |||| ||| |||||||| || | | | || | || ||| || |
Sbjct 1756723 GTACCACCGCCCAAATCGAAAATAAGGACGTACTTCTCCTCCTC--GGTCTTACCAGCAC 1756666
Query 518172 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGAC 518231
||||||| || |||| ||||||||| || || || || ||||| | | ||||| || |
Sbjct 1756665 CAAGACCGTATGCAATAGCAGCAGCGGTAGGCTCGTTGATAATACGAAGGACATTGAGGC 1756606
Query 518232 CAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAA 518291
||||||| || ||||| || ||||| || | ||| || ||||| || || |||||||
Sbjct 1756605 CAGCAATGGAGCCAGCATCCTTGGTGGCCTGACGTTGAGAGTCGTTGAAGTAGGCAGGAA 1756546
Query 518292 CAGTAATAACGGC 518304
|||| | |||||
Sbjct 1756545 CAGTGACGACGGC 1756533
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780821606027296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |