Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1 194 2e-44 >seq1 Length=2987201 Score = 194 bits (214), Expect = 2e-44 Identities = 1149/1815 (63%), Gaps = 69/1815 (4%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| | ||| ||||||| ||| | || ||||| ||||| || || || || Sbjct 1206163 CCCTCAGCATATGATCATGCGCGTCTCCATTGGTATTCATGGCGATGACATACCCAAAGT 1206222 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| || |||||| |||| |||||| | || ||| | | Sbjct 1206223 CGTAGAGACTTACAACCTTATGTCCAACAAATACTTCACCCACGCCTCGCCCACCTTGTA 1206282 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACA---AGGA 111787 ||| || || || |||| || || ||| | || ||||| | ||||| |||| Sbjct 1206283 CAATGCAGGAACTCCAAAGCCTCAGATGAGCTCGTGCTTCCTCGT---AAACATGAAGGA 1206339 Query 111788 GGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGC 111847 ||||| || | || ||||||| ||||| | || || | ||||| |||| || Sbjct 1206340 CGATTCTATTGAGGGTATTTACGATACTCTGAAGAGCTGCGCGCTCATCTCGAAGTCTGC 1206399 Query 111848 TGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGT 111905 ||||| || ||| | | ||| | || | || | | ||| ||| ||| ||| Sbjct 1206400 CGGTGGGATTGGGCTCAGTGTGCATAACATCCGCGCTACT--GGCTCATATATAGCTGGT 1206457 Query 111906 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 111965 || || || || |||| ||| |||| ||| | || || | ||| ||| || || Sbjct 1206458 ACGAACGGAACCTCGAATGGGATTCTTCCCATGTTGCGTGTGTACAACAACACTGCTCGT 1206517 Query 111966 TATGTAAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCCA 112019 || || |||||| |||| |||| | || | || |||| || ||||| Sbjct 1206518 TACGTCGACCAAGGTGGGAA---CAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCG 1206574 Query 112020 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCG 112079 ||||| | ||| | | || || | || |||| || || || | || ||| Sbjct 1206575 TGGCATGACGATGTGTTCGACTTTATCGACCTGCGCAAAAATCACGGCAAGGAAGAGATT 1206634 Query 112080 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139 || |||||||| ||| || || |||||||| ||||| ||||||||| | || | Sbjct 1206635 CGCGCACGCGATCTTTTCATGGCCCTTTGGATTCCCGATCTGTTCATGAAGCGCGTCAAA 1206694 Query 112140 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGT 112198 | | || ||||| | || | || || || || || || || || | || | Sbjct 1206695 GCGGATGCTGATTGGACACTTATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACGTTTA 1206753 Query 112199 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGAC 112258 || || || ||||| || || ||| ||||| || |||| | || | || Sbjct 1206754 CGGAGATGAATTTGAGGCTCTTTACGAGAAGTATGA-----AAAGGCTGGAAAGGGCCGT 1206808 Query 112259 GGTGCCA-----GCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGG 112312 || ||| ||| | || | | ||| | |||||||| || |||| ||||||||||| Sbjct 1206809 CGTACCATAAAGGCT-CAGAAGCTTTGGTACGCTATTCTTGAGGCTCAGACCGAGACTGG 1206867 Query 112313 TACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 112372 || || | ||||| ||||| || || |||| ||||| || || |||||| | || Sbjct 1206868 TAACCCCTTCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAATCTTGG 1206927 Query 112373 TGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGAC 112432 |||||||| ||||| | ||| ||||| | || | | || | || ||||| Sbjct 1206928 AACCATCAAGAGCTCCAATTTGTGTTGCGAAATTGTTGAGTATTCATCCCCTGAGGAGAC 1206987 Query 112433 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCC--CAAGTATGTGGATCCAG--AGACAA 112488 |||||||| ||||| || || | || ||||| | ||| | ||| ||| Sbjct 1206988 TGCTGTGTGCAACCTTGCCTCTGTAGCCCTCCCTGCTTTTATTAAAACGCAGGAAGATGG 1207047 Query 112489 AG-ACA-TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAA 112546 || ||| ||||| | | | || ||| ||| || | || ||| | || Sbjct 1207048 AGTACAGTTTGACTTCAAGAGTCTTCACAGCGTTGTCAAGGTGATTACTCGGAACTTGAA 1207107 Query 112547 CAGAGTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAG 112603 || | || || | ||| | |||||| ||| ||| |||||| ||||| ||| | Sbjct 1207108 CAACATCATCGACAAAAACTATTACCCAGTTCCTGAG---GCTCGTCTGTCTAACATGCG 1207164 Query 112604 ACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGT-CGCC 112662 || || || |||| || |||||||||||||| || |||| ||| ||| | | |||| Sbjct 1207165 TCATCGCCCCATTGCCCTGGGTGTCCAAGGTCTTGCTGATGCCTTC-TTCATGCTGCGCC 1207223 Query 112663 ACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATC 112722 | || || || || || |||||||| |||| | | || |||||||| || || | Sbjct 1207224 TTCCTTTCGACTCTGAAGAGGCGAAGGAGCTCAACGTCCAGATCTTTGAGACTATCTACC 1207283 Query 112723 ACGCCGCTCTTGAGGCGAGTTCG---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCT 112779 ||| ||| | |||||| ||| |||||||| || || ||||| ||||| | | Sbjct 1207284 ACGGAGCTGTGGAGGCG---TCGATTGAGTTGGCTCAGCGCGACGGTCCTTATGAGTCTT 1207340 Query 112780 TTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGA---G 112835 ||||| ||| || || |||||| | |||| | ||| |||||| | | | Sbjct 1207341 ACGAGGGCAGTCCTGCCTC-CAAGGGTGAGCTTTCCTACGATTTGTGGGGTGTTAATCCC 1207399 Query 112836 ACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAG--GAGAAGGGTCTTC 112893 ||| ||||| | || ||||| |||| |||| || ||| | || | || |||| Sbjct 1207400 ACCGAGCTT---TGGGATTGGGATACTCTGAAGG--CGGATCTGGCTAAGTACGGGCTTC 1207454 Query 112894 GTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATA 112953 |||| || || | || || ||||| || || || ||| | || || ||||| | | Sbjct 1207455 GTAATTCGCTCTTAGTTGCTCCGATGCCTACCGCGTCGACCTCTCAGATTTTGGGCTACA 1207514 Query 112954 ATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGT 113013 |||||||||| || || ||||| | || |||| | | | ||||| ||||||| Sbjct 1207515 ATGAATGCTTCGAGCCATACACCTCAAATTTCTACTCGCGCCGTGTTCTCGCCGGAGAGT 1207574 Query 113014 TTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGG 113073 | ||||||||| ||||| || | ||||| || || || || ||| | | | Sbjct 1207575 TCCAGATTGTCAATCCTTATCTCTTGAAGGACCTTGTCGAAATGGGCCTTTGGAACGACG 1207634 Query 113074 ATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAG 113133 | |||||| | | | || | || || || ||| | | ||| ||||| | Sbjct 1207635 ACATGAAGAACCGTCTCGTTGCCTCTGGGGGCTCGATTAAGGACATTCCCTCGATTCCTG 1207694 Query 113134 ATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACA 113193 |||| | || | | ||| ||||||||||| |||| |||| | || || | Sbjct 1207695 ATGACCTCAAAGACCTCTACAAGACAGTTTGGGAGATCAGTCAAAAGGTGATTATCGATA 1207754 Query 113194 TGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGA--ATCTATTCATGGA 113251 ||||||| | | || | ||||| || |||||||| ||| ||| |||||| ||| | Sbjct 1207755 TGGCCGCTGGCAGAGGACCTTTCATCGACCAAAGTCAGAGTCTGAACATCTAT--ATGCA 1207812 Query 113252 AAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAA 113311 | || || ||| |||||| | ||||||| | ||| | ||| || || ||||| Sbjct 1207813 ATCCCCCACAATGGGCAAGCTTACGAGTATGCACTTCTACGGCTGGTCTAAAGGGCTCAA 1207872 Query 113312 AACGGGGATGTATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGA 113371 || || ||||| || || || || | || || || ||||| |||| | |||| Sbjct 1207873 GACCGGTATGTACTATCTGCGCACTCAAGCCGCTTCGGCACCGATTCAATTCACTGTTGA 1207932 Query 113372 ACCAGAATGTGTGGC 113386 | ||| | | |||| Sbjct 1207933 CCAAGAGTCTCTGGC 1207947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742275851520