Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 3e-20
>seq3
Length=2072284
Score = 116 bits (128), Expect = 3e-20
Identities = 319/485 (66%), Gaps = 8/485 (2%)
Strand=Plus/Plus
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
||||| || || |||||||| || |||||| | || || |||| ||| | |||||
Sbjct 1756185 GTTGAGATCATCGCCAATGAGCAGGGTAACCGTGTCACCCCGTCTTTCGTTGCCTTCACT 1756244
Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171
|| | || | | || | |||||||| || || | || || | || || | ||
Sbjct 1756245 GATAAGGAGCGTCTAATCGGTGATGCTGCCAAGAACCAGGCTGCGCTCAACCCGAGAAAC 1756304
Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231
||| |||| |||||||| ||| | ||||| | |||| |||| | ||||| |||
Sbjct 1756305 ACTGTTTTCGATGCTAAGCGTCTTATTGGTCGTCGTTTCGATGAGACTACTGTCCAGAGC 1756364
Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291
||||| ||| ||||| ||| | | || | || || || | ||||| | |
Sbjct 1756365 GATATCAAGAGCTGGCCCTTCAAGGTCATTGACAGAAACGGCAACCCATTCATTGAGGTT 1756424
Query 550292 -ACT--CATGAAGGATCTGTTAAACAATTT-TCACCAGAACAAATTTCATCTATGGTTTT 550347
| | | || || | || || | ||| || || | | ||||| | |||||| |
Sbjct 1756425 GAGTACCTTGGAGAAACT----AAGACTTTCTCTCCTCAGGAGATTTCTGCCATGGTTCT 1756480
Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAAT 550407
| || ||||| | | ||| || ||| || | ||| | || || |
Sbjct 1756481 TGTCAAGATGAAGGAGATCGCCGAGGCCAAGCTTGCCCAGAAGGTTGACAAGGCCGTCGT 1756540
Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467
||||| || || || || || ||||| |||||||| || || || |||||||| ||
Sbjct 1756541 CACTGTTCCTGCCTACTTCAACGACTCTCAACGTCAGGCCACCAAGGATGCTGGCTCCAT 1756600
Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527
|||||| || ||||| |||||||||||||| || ||||| |||||||| ||||||| ||
Sbjct 1756601 TGCTGGCCTCAATGTCCTTCGTATTATCAACGAGCCTACCGCTGCTGCTATTGCATACGG 1756660
Query 550528 ACTTG 550532
||||
Sbjct 1756661 TCTTG 1756665
Score = 98.7 bits (108), Expect = 8e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459
|| || || ||||| || || || || || ||||| || ||||| || || || || ||
Sbjct 232706 GCCGTCATCACTGTCCCTGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGACGCC 232765
Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519
||| |||||||| || || || |||||||||||||| || || ||||| ||||| ||
Sbjct 232766 GGAACCATTGCTGGTCTCAACGTCCTTCGTATTATCAACGAGCCCACTGCGGCTGCCATT 232825
Query 550520 GCATATGGACTTGATAA 550536
||||| || ||||| ||
Sbjct 232826 GCATACGGCCTTGACAA 232842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029295153847840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |