Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1 187 5e-42 >seq1 Length=2987201 Score = 187 bits (206), Expect = 5e-42 Identities = 1002/1582 (63%), Gaps = 67/1582 (4%) Strand=Plus/Minus Query 212582 CTTG-GTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGTGCATGTGCA 212640 |||| ||||| ||||||||||| |||||||| || || || |||||||| | ||||| Sbjct 1207901 CTTGAGTGCGCAGATAGTACATACCGGTCTTGAGCCCTTTAGACCAGCCGTAGAAGTGCA 1207842 Query 212641 TTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTAGGTTCA 212700 | || || || || | | | || || || || || | ||||| Sbjct 1207841 TACTCGTAAGCTT-----GCCCATTGTGGGGG--AT-----TG---CATATAGATGTTCA 1207797 Query 212701 GGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCTCTCT 212760 | |||||| ||||| ||||| || | ||| |||||||||| || || || | | | Sbjct 1207796 GACTCTGACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGATAATCACCTTTT 1207737 Query 212761 GGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGT 212820 | || |||||| || |||||| ||| ||||||||||| || || | ||| |||| Sbjct 1207736 GACTGATCTCCCAAACTGTCTTGTAGAGGTCTTTGAGGTCATCAGGAATCGAGGGAATGT 1207677 Query 212821 TCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCG------CATGTCCTCGTTCCAGA 212874 || | || |||| | | || | || || |||||| |||||||| | Sbjct 1207676 CCTTAATCGAGCCCCC----AGAGGCAACG--AGACGGTTCTTCATGTCGTCGTTCCAAA 1207623 Query 212875 GGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGA 212934 ||||| | | ||| ||| | || | ||| ||||| |||||||| || || | || Sbjct 1207622 GGCCCATTTCGACAAGGTCCTTCAAGAGATAAGGATTGACAATCTGGAACTCTCCGGCGA 1207563 Query 212935 GCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAA 212994 | || | | | ||| || ||||| ||||| ||||||| || || |||| |||| || Sbjct 1207562 GAACACGGCGCGAGTAGAAATTTGAGGTGTATGGCTCGAAGCATTCATTGTAGCCCAAAA 1207503 Query 212995 TCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCT 213054 |||| | || || || ||||| ||||| || | ||| || | | |||| || Sbjct 1207502 TCTGAGAGGTCGACGCGGTAGGCATCGGAGCAACTAAGAGCGAATTACGAAGCCCGTACT 1207443 Query 213055 C-GCC-GATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTT 213112 ||| ||| | | | || | | |||| ||||| || || | || Sbjct 1207442 TAGCCAGATCCGCCTTCAGAG-TAT-CCCAATCCCAA---------AGCTCGGTGGGATT 1207394 Query 213113 CACGTTCCACATGTCAAACTGCAAGATG-CCTTTGCTCACGGGGCTGCCCTGGTAAGAGG 213171 || ||||| || | | ||| | || ||| | || ||||||| |||||| Sbjct 1207393 AACACCCCACAAATCGTAG-GAAAGCTCACCCTTGGAGGCAGGACTGCCCTCGTAAGACT 1207335 Query 213172 AGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGG 213231 || || || | || |||| ||| ||||||| || || ||| |||||| | Sbjct 1207334 CATAAGGACCGTCGCGCTGAGCCAACTCAATCGACGCCTCCACAGCTCCGTGGTAGATAG 1207275 Query 213232 TTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCAT---CATCA 213288 | ||||| |||| |||||||| ||| |||||| || ||| || | || || Sbjct 1207274 TCTCAAAGATCTGGACGTTGAGCTCCTTCGCCTCTTCAGAGTCGAAAGGAAGGCGCAGCA 1207215 Query 213289 TGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGT 213348 || ||| ||||||| || || ||||| || | | | ||||| | || | || || Sbjct 1207214 TGAA---GAAGGCATCAGCAAGACCTTGGACACCCAGGGCAATGGGGCGATGACGCATGT 1207158 Query 213349 TAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTG 213407 ||||| |||| ||| | |||||| |||| ||||||||| ||||| | ||| Sbjct 1207157 TAGACAGACGAGC-CTCAGGAACTGGGTAATAGTTTTTGTCGATGATGTTGTTCAAGTTC 1207099 Query 213408 CGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACAC-GTAGCCCC-CGT 213465 || || ||| ||| || | || |||| ||| | || ||| || | | Sbjct 1207098 CGAGTAATCACCTTGACAACGCTGTGAAG--ACTCTTGAAGTCAAACTGTACTCCATCTT 1207041 Query 213466 CCTGC------ACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCT 213519 ||||| | ||| |||| ||||| | ||| |||||||| || || ||||| Sbjct 1207040 CCTGCGTTTTAATAAAAGCAGGGAGGGCTACAGAGGCAAGGTTGCACACAGCAGTCTCCT 1206981 Query 213520 GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGT 213579 || | || ||||| | || ||| |||| ||| || |||||| || || | Sbjct 1206980 CAGGGGATGAATACTCAACAATTTCGCAACACAAATTGGAGCTCTTGATGGTTCCAAGAT 1206921 Query 213580 TCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCT 213639 ||| ||||| ||| |||||||| |||||||||||||||| ||||| || |||| Sbjct 1206920 TCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCT 1206861 Query 213640 CTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAG 213699 | ||| | | | || || | ||| || | | ||||| | || | | | Sbjct 1206860 CGGTCTGAGCCTCAAGAATAGCGTACCAAAGCTTCTGAGCCTTTATGGTACGACGGCCCT 1206801 Query 213700 CTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGT 213759 ||| | | | || |||| ||||| || | | ||||| | || | || Sbjct 1206800 TTCCAGCCTTT---TCATACTTCTCGTAAAGAGCCTCAAATTCATCTCCGTAAACGTCAG 1206744 Query 213760 CCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCT 213819 | || || || || ||| ||||| || |||| || | || || |||| | || Sbjct 1206743 CAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTCCAATCAGCATCCGCTTTGACGCGCT 1206684 Query 213820 GCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCA 213879 ||||||||| || || | ||| || || |||| || || | | | |||| ||| Sbjct 1206683 TCATGAACAGATCGGGAATCCAAAGGGCCATGAAAAGATCGCGTGCGCGAATCTCTTCCT 1206624 Query 213880 CTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGT 213939 || ||||||||||| || | |||||| || | || | ||||||||||| | || Sbjct 1206623 TGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACACATCGTCATGCCACGGCTCGAGGT 1206564 Query 213940 AGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGT 213996 ||||||||||||| || || | |||| || || ||||| || | || ||| Sbjct 1206563 AGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTTGGTCGACGTAACGAGCAGTGTTGT 1206504 Query 213997 TGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACG 214056 || | | |||| | ||| | | ||| || || |||||| || || |||||||| | Sbjct 1206503 TGTACACACGCAACATGGGAAGAATCCCATTCGAGGTTCCGTTCGTACCAGCTATATATG 1206444 Query 214057 AGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCA 214116 |||| | || | | ||| || |||||| || |||||||| |||| ||||| | Sbjct 1206443 AGCCAGTAGCGCGGATGTTATGCACACTGAGCCCAATCCCACCGGCAGACTTCGAGATGA 1206384 Query 214117 TGGCGCAGCGCCTCACAGTCTC 214138 ||||||| | ||| ||| || Sbjct 1206383 GCGCGCAGCTCTTCAGAGTATC 1206362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532613693440