Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1 181 2e-40
>seq1
Length=2987201
Score = 181 bits (200), Expect = 2e-40
Identities = 757/1177 (64%), Gaps = 31/1177 (3%)
Strand=Plus/Minus
Query 221360 GGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAA--GACTGCG 221417
||||| || ||||| ||||| || ||||||| | | ||| | ||| ||| |
Sbjct 1207353 GGACTGCCCTCGTAAGACTCATAAGGACCGTCGCGCTGAGCCAA--CTCAATCGACGCCT 1207296
Query 221418 TCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAG 221477
|| || |||||||||| |||||||||||| |||||| ||| ||||| ||
Sbjct 1207295 CCACAGCTCCGTGGTAGATAGTCTCAAAGATCTGGACGTTGAGCTCCTTCGCCTCTTCAG 1207236
Query 221478 AAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGA 221537
| ||| || | |||||||| ||| | || || || || || || || | | |
Sbjct 1207235 AGTCGAAAGGAAGGCGCAGCATGAAGAAGGCATCAGCAAGACCTTGGACACCCAGGGCAA 1207176
Query 221538 TGGGCCTGTGTCTCCTGTTGGA-AGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596
|||| | || | | |||| || || | || || || || || ||| |||| ||||
Sbjct 1207175 TGGGGCGATGACGCATGTTAGACAGACGA-GCCTCAGGAACTGGGTAATAGTTTTTGTCG 1207117
Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTG 221656
|| | ||||| | |||| |||| || || || || || | || ||| ||
Sbjct 1207116 ATGATGTTGTTCAAGTTCCGAGTAATCACCTTGACAACGCTGTGAAGACTCT------TG 1207063
Query 221657 AACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCC 221716
|| | |||| | || || | | | || | |||||| ||||| || |||
Sbjct 1207062 AAGTCAAACTGTACTCCATCTTCCTGCGTTTTAATAAAAGCAGGGAGGGCTACAGAGGCA 1207003
Query 221717 AGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTG 221776
||||| ||||| || ||| || | | ||||| | || || ||| | |||
Sbjct 1207002 AGGTTGCACACAGCAGTCTCCTCAGGGGATGAATACTCAACAATTTCGCAACACAAATTG 1206943
Query 221777 CTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAG 221836
|| ||||||||| || || | || || || |||||| |||||||| |||||||||
Sbjct 1206942 GAGCTCTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAG 1206883
Query 221837 AGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG 221896
||||| ||||| |||||||| ||||||| | ||||| || ||| || | ||||
Sbjct 1206882 AGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAAGCT-TCTG 1206824
Query 221897 -GCGCTCACCGTCCTCTTGACTGCACCCTCG-GTCTTTTCATAC--CCGGTATAGAGCAT 221952
|| | | || | ||| || | || | |||||||||| | ||| ||||| |
Sbjct 1206823 AGCCTTTATGGTAC----GACGGCCCTTTCCAGCCTTTTCATACTTCTCGTAAAGAGCCT 1206768
Query 221953 GTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACT 222012
|||| | || ||||| | || | ||||| || || | ||| ||||| || |
Sbjct 1206767 --CAAATTCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGT 1206710
Query 222013 CCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCC-TGAA 222071
||| | | ||||||| | || |||||| || || || ||||| || ||| ||||
Sbjct 1206709 CCAATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAA 1206650
Query 222072 AGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAA 222131
| ||||| | | || ||| ||| ||||| ||||| | ||| || | ||| || |
Sbjct 1206649 A-AGATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGA 1206591
Query 222132 AAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCAC 222191
| | || | ||||||||||| || |||| ||| | || || || |||||||| ||||
Sbjct 1206590 ACACATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCAC 1206531
Query 222192 CCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTG 222250
| || || | | | ||| | |||| | | || | | || | | || ||
Sbjct 1206530 CTTGGTCGA-CGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTC 1206472
Query 222251 GATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGAC--A 222308
|| ||||| || || || || | || || | | |||| ||| || |
Sbjct 1206471 GAGGTTCCGTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTA--TGCACACTGA 1206414
Query 222309 TGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGC 222368
|| || |||||||| |||||||| | ||||||||||| ||||| || || |
Sbjct 1206413 GCCCAATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATAC 1206354
Query 222369 CCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGG 222428
|||| ||||| || ||||| | ||| | || || || || |||||||| || | |
Sbjct 1206353 CCTCAATAGAATCGTCCTTCATGTTTACGAGGAAGCACGAGCTCATCTGAGGCTTTGGAG 1206294
Query 222429 AACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGT 222488
| || || ||| ||||| |||||| || ||||| | ||||| || | ||
Sbjct 1206293 TTCCTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGT 1206234
Query 222489 ACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT 222525
| |||||||||||| ||| |||| || || |||||
Sbjct 1206233 AAGTCTCTACGACTTTGGGTATGTCATCGCCATGAAT 1206197
Score = 141 bits (156), Expect = 2e-28
Identities = 463/715 (65%), Gaps = 31/715 (4%)
Strand=Plus/Plus
Query 25603 GCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGG 25662
|| |||||||| || |||||| || || || |||||||| ||| |||||| |
Sbjct 896592 GCTTTCTTTGCTGCTAGTGATGGCATTGTCAATGAGAATCTCGTTGAGCGATTCAGTGGT 896651
Query 25663 GAAGT--GCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATG 25720
|| || | | | | |||||||| ||||||||||| |||||||| || |||||
Sbjct 896652 GAGGTTGGTATTCCC--GAGGCCAAATGTTTCTACGGCTTCCAGATTATGATGGAAAACA 896709
Query 25721 TGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGAC-GTCGCCGAG 25776
| ||||||||| ||| | |||||||| || ||| | | |||| || |
Sbjct 896710 TTCACTCTGAGACTTATTCT---CTTCTGATTGATACATACGTGAAAGACAGT-----AA 896761
Query 25777 AGAGATCGGCTGTTTGGT----GCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCG 25832
|||| || || | || | |||||| ||| ||| ||| | ||||||
Sbjct 896762 AGAGGCCGACTTTCTGTTCAACGCCATCTTCACCATTCCCTCCATTCGCAAGAAGGCTAA 896821
Query 25833 GTGGGCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCT 25891
|||||| | ||||||| | | | ||| |||| || | ||||| || | ||||
Sbjct 896822 GTGGGCACTTCGTTGGATCAGCGACGCTGAGT-CTACCTTCGCAGAGCGCCTAATTGCCT 896880
Query 25892 TTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGC 25951
| |||||||| || || |||| ||||| || |||||||| | ||||||||||| ||
Sbjct 896881 TCGCTGCTGTTGAAGGTGTCTTCTTCAGTGGCTCGTTTGCATCAATCTTCTGGCTGAAAA 896940
Query 25952 AGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGT 26010
|| ||| |||||| ||||| |||||| |||||||| || || | || ||||||
Sbjct 896941 AGCGTGGGCTCATGCCTGGGCT-TACTTTCTCCAACGAACTGATTTCGCGCGATGAGGGT 896999
Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAA 26070
| |||| ||||||||||| || || | || ||||||||| || ||| |
Sbjct 897000 ATGCACACCGATTTTGCCTGTCTCCTATTCA---GCCACTTGCAGAACCGCCCTAGCCGT 897056
Query 26071 GAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGT--TTCNNNNNN 26128
| | ||| | || ||||||| || || || || || ||| | || | |||
Sbjct 897057 GCTATCGTTGAGAGAATCATCACTGAAGCCGTCGACATTGAGCAAGAATACTTC--CGCG 897114
Query 26129 NNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGT 26188
| ||||||||| | ||||||| |||||| | ||||
Sbjct 897115 ATGCTTTGCCTGTAAGTCTTCTCGGCATGAACGCCGACCTCATGAACCAATATGTCGAGT 897174
Query 26189 ATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACC 26248
|| ||||||| | |||||| |||| | | | |||||| | | | || |
Sbjct 897175 TCGTCGCCGACCGTTTGCTGTTGGCTTTGGGCCACAAGCGCGTCTACAATGTGACCAATC 897234
Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAA 26303
|||| ||||||||||| ||||| || | | || |||||||| |||||||| ||
Sbjct 897235 CGTTTGACTTTATGGAGAACATCTCTCTTGCTGGAAAGACCAATTTCTTTGAGAA 897289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844614231040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |