Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1 181 2e-40 >seq1 Length=2987201 Score = 181 bits (200), Expect = 2e-40 Identities = 757/1177 (64%), Gaps = 31/1177 (3%) Strand=Plus/Minus Query 221360 GGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAA--GACTGCG 221417 ||||| || ||||| ||||| || ||||||| | | ||| | ||| ||| | Sbjct 1207353 GGACTGCCCTCGTAAGACTCATAAGGACCGTCGCGCTGAGCCAA--CTCAATCGACGCCT 1207296 Query 221418 TCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAG 221477 || || |||||||||| |||||||||||| |||||| ||| ||||| || Sbjct 1207295 CCACAGCTCCGTGGTAGATAGTCTCAAAGATCTGGACGTTGAGCTCCTTCGCCTCTTCAG 1207236 Query 221478 AAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGA 221537 | ||| || | |||||||| ||| | || || || || || || || | | | Sbjct 1207235 AGTCGAAAGGAAGGCGCAGCATGAAGAAGGCATCAGCAAGACCTTGGACACCCAGGGCAA 1207176 Query 221538 TGGGCCTGTGTCTCCTGTTGGA-AGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596 |||| | || | | |||| || || | || || || || || ||| |||| |||| Sbjct 1207175 TGGGGCGATGACGCATGTTAGACAGACGA-GCCTCAGGAACTGGGTAATAGTTTTTGTCG 1207117 Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTG 221656 || | ||||| | |||| |||| || || || || || | || ||| || Sbjct 1207116 ATGATGTTGTTCAAGTTCCGAGTAATCACCTTGACAACGCTGTGAAGACTCT------TG 1207063 Query 221657 AACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCC 221716 || | |||| | || || | | | || | |||||| ||||| || ||| Sbjct 1207062 AAGTCAAACTGTACTCCATCTTCCTGCGTTTTAATAAAAGCAGGGAGGGCTACAGAGGCA 1207003 Query 221717 AGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTG 221776 ||||| ||||| || ||| || | | ||||| | || || ||| | ||| Sbjct 1207002 AGGTTGCACACAGCAGTCTCCTCAGGGGATGAATACTCAACAATTTCGCAACACAAATTG 1206943 Query 221777 CTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAG 221836 || ||||||||| || || | || || || |||||| |||||||| ||||||||| Sbjct 1206942 GAGCTCTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAG 1206883 Query 221837 AGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG 221896 ||||| ||||| |||||||| ||||||| | ||||| || ||| || | |||| Sbjct 1206882 AGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAAGCT-TCTG 1206824 Query 221897 -GCGCTCACCGTCCTCTTGACTGCACCCTCG-GTCTTTTCATAC--CCGGTATAGAGCAT 221952 || | | || | ||| || | || | |||||||||| | ||| ||||| | Sbjct 1206823 AGCCTTTATGGTAC----GACGGCCCTTTCCAGCCTTTTCATACTTCTCGTAAAGAGCCT 1206768 Query 221953 GTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACT 222012 |||| | || ||||| | || | ||||| || || | ||| ||||| || | Sbjct 1206767 --CAAATTCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGT 1206710 Query 222013 CCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCC-TGAA 222071 ||| | | ||||||| | || |||||| || || || ||||| || ||| |||| Sbjct 1206709 CCAATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAA 1206650 Query 222072 AGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAA 222131 | ||||| | | || ||| ||| ||||| ||||| | ||| || | ||| || | Sbjct 1206649 A-AGATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGA 1206591 Query 222132 AAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCAC 222191 | | || | ||||||||||| || |||| ||| | || || || |||||||| |||| Sbjct 1206590 ACACATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCAC 1206531 Query 222192 CCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTG 222250 | || || | | | ||| | |||| | | || | | || | | || || Sbjct 1206530 CTTGGTCGA-CGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTC 1206472 Query 222251 GATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGAC--A 222308 || ||||| || || || || | || || | | |||| ||| || | Sbjct 1206471 GAGGTTCCGTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTA--TGCACACTGA 1206414 Query 222309 TGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGC 222368 || || |||||||| |||||||| | ||||||||||| ||||| || || | Sbjct 1206413 GCCCAATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATAC 1206354 Query 222369 CCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGG 222428 |||| ||||| || ||||| | ||| | || || || || |||||||| || | | Sbjct 1206353 CCTCAATAGAATCGTCCTTCATGTTTACGAGGAAGCACGAGCTCATCTGAGGCTTTGGAG 1206294 Query 222429 AACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGT 222488 | || || ||| ||||| |||||| || ||||| | ||||| || | || Sbjct 1206293 TTCCTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGT 1206234 Query 222489 ACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT 222525 | |||||||||||| ||| |||| || || ||||| Sbjct 1206233 AAGTCTCTACGACTTTGGGTATGTCATCGCCATGAAT 1206197 Score = 141 bits (156), Expect = 2e-28 Identities = 463/715 (65%), Gaps = 31/715 (4%) Strand=Plus/Plus Query 25603 GCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGG 25662 || |||||||| || |||||| || || || |||||||| ||| |||||| | Sbjct 896592 GCTTTCTTTGCTGCTAGTGATGGCATTGTCAATGAGAATCTCGTTGAGCGATTCAGTGGT 896651 Query 25663 GAAGT--GCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATG 25720 || || | | | | |||||||| ||||||||||| |||||||| || ||||| Sbjct 896652 GAGGTTGGTATTCCC--GAGGCCAAATGTTTCTACGGCTTCCAGATTATGATGGAAAACA 896709 Query 25721 TGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGAC-GTCGCCGAG 25776 | ||||||||| ||| | |||||||| || ||| | | |||| || | Sbjct 896710 TTCACTCTGAGACTTATTCT---CTTCTGATTGATACATACGTGAAAGACAGT-----AA 896761 Query 25777 AGAGATCGGCTGTTTGGT----GCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCG 25832 |||| || || | || | |||||| ||| ||| ||| | |||||| Sbjct 896762 AGAGGCCGACTTTCTGTTCAACGCCATCTTCACCATTCCCTCCATTCGCAAGAAGGCTAA 896821 Query 25833 GTGGGCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCT 25891 |||||| | ||||||| | | | ||| |||| || | ||||| || | |||| Sbjct 896822 GTGGGCACTTCGTTGGATCAGCGACGCTGAGT-CTACCTTCGCAGAGCGCCTAATTGCCT 896880 Query 25892 TTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGC 25951 | |||||||| || || |||| ||||| || |||||||| | ||||||||||| || Sbjct 896881 TCGCTGCTGTTGAAGGTGTCTTCTTCAGTGGCTCGTTTGCATCAATCTTCTGGCTGAAAA 896940 Query 25952 AGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || ||| |||||| ||||| |||||| |||||||| || || | || |||||| Sbjct 896941 AGCGTGGGCTCATGCCTGGGCT-TACTTTCTCCAACGAACTGATTTCGCGCGATGAGGGT 896999 Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAA 26070 | |||| ||||||||||| || || | || ||||||||| || ||| | Sbjct 897000 ATGCACACCGATTTTGCCTGTCTCCTATTCA---GCCACTTGCAGAACCGCCCTAGCCGT 897056 Query 26071 GAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGT--TTCNNNNNN 26128 | | ||| | || ||||||| || || || || || ||| | || | ||| Sbjct 897057 GCTATCGTTGAGAGAATCATCACTGAAGCCGTCGACATTGAGCAAGAATACTTC--CGCG 897114 Query 26129 NNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGT 26188 | ||||||||| | ||||||| |||||| | |||| Sbjct 897115 ATGCTTTGCCTGTAAGTCTTCTCGGCATGAACGCCGACCTCATGAACCAATATGTCGAGT 897174 Query 26189 ATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACC 26248 || ||||||| | |||||| |||| | | | |||||| | | | || | Sbjct 897175 TCGTCGCCGACCGTTTGCTGTTGGCTTTGGGCCACAAGCGCGTCTACAATGTGACCAATC 897234 Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAA 26303 |||| ||||||||||| ||||| || | | || |||||||| |||||||| || Sbjct 897235 CGTTTGACTTTATGGAGAACATCTCTCTTGCTGGAAAGACCAATTTCTTTGAGAA 897289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844614231040