Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1 221 1e-52 >seq1 Length=2987201 Score = 221 bits (244), Expect = 1e-52 Identities = 1120/1757 (64%), Gaps = 61/1757 (3%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| | ||| ||||||| ||| | || || || || || || ||||| || Sbjct 1206163 CCCTCAGCATATGATCATGCGCGTCTCCATTGGTATTCATGGCGATGACATACCCAAAGT 1206222 Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | | ||||| ||| || |||||| | | || |||| ||||| | || ||| | | Sbjct 1206223 CGTAGAGACTTACAACCTTATGTCCAACAAATAC-TTCACCCACGCCTCGCCCACCTTGT 1206281 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||||| || || |||| || |||||| | |||||||| | || ||||| | Sbjct 1206282 ACAATGCAGGAACTCCAAAGCCTCAGATGAGCTCGTGCTTCCTCGTAAACATGAAGGACG 1206341 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 | || || | ||||| || | ||||| | | || |||| ||||| |||| || | Sbjct 1206342 ATTCTATTGAGGGTATTTACGATACTCTGAAGAGCTGCGCGCTCATCTCGAAGTCTGCCG 1206401 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | || |||||| | | ||| | | | || | | || ||| || || | Sbjct 1206402 GTGGGATTGGGCTCAGTGTGCATAACATCCGCGCTACTGGCTCATATATAGCTGGTACGA 1206461 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 | || || |||| ||| |||| ||| | || || | ||| ||| || || || | Sbjct 1206462 ACGGAACCTCGAATGGGATTCTTCCCATGTTGCGTGTGTACAACAACACTGCTCGTTACG 1206521 Query 75570 TAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGGC 75623 | | |||| ||| |||| | || || | || ||||| | || || |||| Sbjct 1206522 TCGACCAAGGTGGGAA---CAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCGTGGC 1206578 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683 ||| |||| | | || || | || | || || || || | |||||| ||| Sbjct 1206579 ATGACGATGTGTTCGACTTTATCGACCTGCGCAAAAATCACGGCAAGGAAGAGATTCGCG 1206638 Query 75684 GTAGAGATCTCTTTTCAT--CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGA 75741 | ||||| |||||| |||| |||||||| || || ||||||||||| || | | Sbjct 1206639 CACGCGATCT--TTTCATGGCCCTTTGGATTCCCGATCTGTTCATGAAGCGCGTCAAAGC 1206696 Query 75742 GGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGG 75800 || || | | ||| | ||| | || || || || || || || || | |||| | Sbjct 1206697 GGATGCTGATTGGACACTTATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACGTTTACG 1206755 Query 75801 GTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTG 75860 | || || ||||| || || ||| ||||||||| ||| || | | | || | | Sbjct 1206756 GAGATGAATTTGAGGCTCTTTACGAGAAGTATGAAAAGGCTGGAAAGGGC----CGTC-G 1206810 Query 75861 TACCA----GCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915 ||||| | | | || | ||||| | |||||||| | | ||||| |||||||| | Sbjct 1206811 TACCATAAAGGCTCAGAAGCTTTGGTACGCTATTCTTGAGGCTCAGACCGAGACTGGTAA 1206870 Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975 || | ||||| |||||||||||| ||| ||||| ||||| |||||| | ||||| Sbjct 1206871 CCCCTTCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAATCTTGGAAC 1206930 Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 ||||||||||| ||| | || |||||| | ||||| || || ||||| || Sbjct 1206931 CATCAAGAGCTCCAATTTGTGTTGCGAAATTGTTGAGTATTCATCCCCTGAGGAGACTGC 1206990 Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA------ATGAAGA--GACT 76087 ||| ||||| | || || | ||||| || | | | | | ||||| || | Sbjct 1206991 TGTGTGCAACCTTGCCTCTGTAGCCCTCCCTGCTTTTATTAAAACGCAGGAAGATGGAGT 1207050 Query 76088 CGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAAC 76147 || ||||| | | | ||||| | ||| | |||| || | ||| Sbjct 1207051 -ACA-GTTTGACTTCAAGAGTCTTCACAGCGTTGTCAAGGTGATTACTCGGAACTTGAAC 1207108 Query 76148 CGAGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGA 76204 |||| |||| ||| | ||| || || |||| || || |||||| ||||| Sbjct 1207109 AACATCATCGACAAAAACTATTACCCAGTTCCTGAG---GCTCGTCTGTCTAACATGCGT 1207165 Query 76205 CACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG-TGCCGCTA 76263 || | || |||| ||||||| |||||||| || |||| || | || ||| || Sbjct 1207166 CATCGCCCCATTGCCCTGGGTGTCCAAGGTCTTGCTGATGCCTTCTTCATGCTGCGCCTT 1207225 Query 76264 CGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCA 76323 | | || || || || || || |||||| | || | | |||||||| || || || || Sbjct 1207226 C-CTTTCGACTCTGAAGAGGCGAAGGAGCTCAACGTCCAGATCTTTGAGACTATCTACCA 1207284 Query 76324 CGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGA 76383 || | | |||||||| ||| |||||| | | | ||| | |||||| | | || Sbjct 1207285 CGGAGCTGTGGAGGCGTCGATTGAGTTGGCTCAGCGCGACGGTCCTTATGAGTCTTACGA 1207344 Query 76384 GGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGA---AACCAA 76440 ||| ||| || ||| | || | |||| | ||| |||||| | | | ||| | Sbjct 1207345 GGGCAGTCCTGCCTCCAAGGGTGAGCTTTCCTACGATTTGTGGGGTGTTAATCCCACCGA 1207404 Query 76441 GCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAG--GAGAAGGGTCTTCGTAAC 76498 ||| | || |||||| ||| |||| || ||| | || | || |||||||| Sbjct 1207405 GCT---TTGGGATTGGGATACTCTGAAGG--CGGATCTGGCTAAGTACGGGCTTCGTAAT 1207459 Query 76499 AGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAA 76558 || || | || || ||||| || || || ||| | || || ||||| | |||||| Sbjct 1207460 TCGCTCTTAGTTGCTCCGATGCCTACCGCGTCGACCTCTCAGATTTTGGGCTACAATGAA 1207519 Query 76559 TGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTC 76618 ||||| || |||||||| |||| ||||| | | | ||||| || ||||| Sbjct 1207520 TGCTTCGAGCCATACACCTCAAATTTCTACTCGCGCCGTGTTCTCGCCGGAGAGTTCCAG 1207579 Query 76619 ATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATG 76678 |||||||| | ||| | || ||||| | || || || ||| | | || ||| Sbjct 1207580 ATTGTCAATCCTTATCTCTTGAAGGACCTTGTCGAAATGGGCCTTTGGAACGACGACATG 1207639 Query 76679 AAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGAT 76738 ||| | | | || | || || || ||| | | || | || || ||||| Sbjct 1207640 AAGAACCGTCTCGTTGCCTCTGGGGGCTCGATTAAGGACATTCCCTCGATTCCTGATGAC 1207699 Query 76739 ATCAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATG-TCATTGACATGGC 76797 |||| | |||||| ||||| ||||| ||| || |||| || | || || ||||| Sbjct 1207700 CTCAAAGACCTCTACAAGACAGTTTGGGAGATC-AGTCAAAAGGTGATTATCGATATGGC 1207758 Query 76798 CGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGA--ATCTATTCATGGAAAGT 76855 ||| | | || | ||||| || |||||||| ||| ||| |||||| ||| || Sbjct 1207759 CGCTGGCAGAGGACCTTTCATCGACCAAAGTCAGAGTCTGAACATCTAT--ATGCAATCC 1207816 Query 76856 CCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACC 76915 || || ||| |||||| | |||||| | |||| ||| | |||||||| ||| Sbjct 1207817 CCCACAATGGGCAAGCTTACGAGTATGCACTTCTACGGCTGGTCTAAAGGGCTCAAGACC 1207876 Query 76916 GGAATGTACTATCTCCG 76932 || ||||||||||| || Sbjct 1207877 GGTATGTACTATCTGCG 1207893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569480686080