Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1 221 1e-52
>seq1
Length=2987201
Score = 221 bits (244), Expect = 1e-52
Identities = 1120/1757 (64%), Gaps = 61/1757 (3%)
Strand=Plus/Plus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
||| ||| | ||| ||||||| ||| | || || || || || || ||||| ||
Sbjct 1206163 CCCTCAGCATATGATCATGCGCGTCTCCATTGGTATTCATGGCGATGACATACCCAAAGT 1206222
Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329
| | ||||| ||| || |||||| | | || |||| ||||| | || ||| | |
Sbjct 1206223 CGTAGAGACTTACAACCTTATGTCCAACAAATAC-TTCACCCACGCCTCGCCCACCTTGT 1206281
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
|||||| || || |||| || |||||| | |||||||| | || ||||| |
Sbjct 1206282 ACAATGCAGGAACTCCAAAGCCTCAGATGAGCTCGTGCTTCCTCGTAAACATGAAGGACG 1206341
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449
| || || | ||||| || | ||||| | | || |||| ||||| |||| || |
Sbjct 1206342 ATTCTATTGAGGGTATTTACGATACTCTGAAGAGCTGCGCGCTCATCTCGAAGTCTGCCG 1206401
Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509
| || |||||| | | ||| | | | || | | || ||| || || |
Sbjct 1206402 GTGGGATTGGGCTCAGTGTGCATAACATCCGCGCTACTGGCTCATATATAGCTGGTACGA 1206461
Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569
| || || |||| ||| |||| ||| | || || | ||| ||| || || || |
Sbjct 1206462 ACGGAACCTCGAATGGGATTCTTCCCATGTTGCGTGTGTACAACAACACTGCTCGTTACG 1206521
Query 75570 TAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGGC 75623
| | |||| ||| |||| | || || | || ||||| | || || ||||
Sbjct 1206522 TCGACCAAGGTGGGAA---CAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCGTGGC 1206578
Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683
||| |||| | | || || | || | || || || || | |||||| |||
Sbjct 1206579 ATGACGATGTGTTCGACTTTATCGACCTGCGCAAAAATCACGGCAAGGAAGAGATTCGCG 1206638
Query 75684 GTAGAGATCTCTTTTCAT--CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGA 75741
| ||||| |||||| |||| |||||||| || || ||||||||||| || | |
Sbjct 1206639 CACGCGATCT--TTTCATGGCCCTTTGGATTCCCGATCTGTTCATGAAGCGCGTCAAAGC 1206696
Query 75742 GGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGG 75800
|| || | | ||| | ||| | || || || || || || || || | |||| |
Sbjct 1206697 GGATGCTGATTGGACACTTATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACGTTTACG 1206755
Query 75801 GTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTG 75860
| || || ||||| || || ||| ||||||||| ||| || | | | || | |
Sbjct 1206756 GAGATGAATTTGAGGCTCTTTACGAGAAGTATGAAAAGGCTGGAAAGGGC----CGTC-G 1206810
Query 75861 TACCA----GCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915
||||| | | | || | ||||| | |||||||| | | ||||| |||||||| |
Sbjct 1206811 TACCATAAAGGCTCAGAAGCTTTGGTACGCTATTCTTGAGGCTCAGACCGAGACTGGTAA 1206870
Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975
|| | ||||| |||||||||||| ||| ||||| ||||| |||||| | |||||
Sbjct 1206871 CCCCTTCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAATCTTGGAAC 1206930
Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035
||||||||||| ||| | || |||||| | ||||| || || ||||| ||
Sbjct 1206931 CATCAAGAGCTCCAATTTGTGTTGCGAAATTGTTGAGTATTCATCCCCTGAGGAGACTGC 1206990
Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA------ATGAAGA--GACT 76087
||| ||||| | || || | ||||| || | | | | | ||||| || |
Sbjct 1206991 TGTGTGCAACCTTGCCTCTGTAGCCCTCCCTGCTTTTATTAAAACGCAGGAAGATGGAGT 1207050
Query 76088 CGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAAC 76147
|| ||||| | | | ||||| | ||| | |||| || | |||
Sbjct 1207051 -ACA-GTTTGACTTCAAGAGTCTTCACAGCGTTGTCAAGGTGATTACTCGGAACTTGAAC 1207108
Query 76148 CGAGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGA 76204
|||| |||| ||| | ||| || || |||| || || |||||| |||||
Sbjct 1207109 AACATCATCGACAAAAACTATTACCCAGTTCCTGAG---GCTCGTCTGTCTAACATGCGT 1207165
Query 76205 CACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG-TGCCGCTA 76263
|| | || |||| ||||||| |||||||| || |||| || | || ||| ||
Sbjct 1207166 CATCGCCCCATTGCCCTGGGTGTCCAAGGTCTTGCTGATGCCTTCTTCATGCTGCGCCTT 1207225
Query 76264 CGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCA 76323
| | || || || || || || |||||| | || | | |||||||| || || || ||
Sbjct 1207226 C-CTTTCGACTCTGAAGAGGCGAAGGAGCTCAACGTCCAGATCTTTGAGACTATCTACCA 1207284
Query 76324 CGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGA 76383
|| | | |||||||| ||| |||||| | | | ||| | |||||| | | ||
Sbjct 1207285 CGGAGCTGTGGAGGCGTCGATTGAGTTGGCTCAGCGCGACGGTCCTTATGAGTCTTACGA 1207344
Query 76384 GGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGA---AACCAA 76440
||| ||| || ||| | || | |||| | ||| |||||| | | | ||| |
Sbjct 1207345 GGGCAGTCCTGCCTCCAAGGGTGAGCTTTCCTACGATTTGTGGGGTGTTAATCCCACCGA 1207404
Query 76441 GCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAG--GAGAAGGGTCTTCGTAAC 76498
||| | || |||||| ||| |||| || ||| | || | || ||||||||
Sbjct 1207405 GCT---TTGGGATTGGGATACTCTGAAGG--CGGATCTGGCTAAGTACGGGCTTCGTAAT 1207459
Query 76499 AGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAA 76558
|| || | || || ||||| || || || ||| | || || ||||| | ||||||
Sbjct 1207460 TCGCTCTTAGTTGCTCCGATGCCTACCGCGTCGACCTCTCAGATTTTGGGCTACAATGAA 1207519
Query 76559 TGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTC 76618
||||| || |||||||| |||| ||||| | | | ||||| || |||||
Sbjct 1207520 TGCTTCGAGCCATACACCTCAAATTTCTACTCGCGCCGTGTTCTCGCCGGAGAGTTCCAG 1207579
Query 76619 ATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATG 76678
|||||||| | ||| | || ||||| | || || || ||| | | || |||
Sbjct 1207580 ATTGTCAATCCTTATCTCTTGAAGGACCTTGTCGAAATGGGCCTTTGGAACGACGACATG 1207639
Query 76679 AAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGAT 76738
||| | | | || | || || || ||| | | || | || || |||||
Sbjct 1207640 AAGAACCGTCTCGTTGCCTCTGGGGGCTCGATTAAGGACATTCCCTCGATTCCTGATGAC 1207699
Query 76739 ATCAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATG-TCATTGACATGGC 76797
|||| | |||||| ||||| ||||| ||| || |||| || | || || |||||
Sbjct 1207700 CTCAAAGACCTCTACAAGACAGTTTGGGAGATC-AGTCAAAAGGTGATTATCGATATGGC 1207758
Query 76798 CGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGA--ATCTATTCATGGAAAGT 76855
||| | | || | ||||| || |||||||| ||| ||| |||||| ||| ||
Sbjct 1207759 CGCTGGCAGAGGACCTTTCATCGACCAAAGTCAGAGTCTGAACATCTAT--ATGCAATCC 1207816
Query 76856 CCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACC 76915
|| || ||| |||||| | |||||| | |||| ||| | |||||||| |||
Sbjct 1207817 CCCACAATGGGCAAGCTTACGAGTATGCACTTCTACGGCTGGTCTAAAGGGCTCAAGACC 1207876
Query 76916 GGAATGTACTATCTCCG 76932
|| ||||||||||| ||
Sbjct 1207877 GGTATGTACTATCTGCG 1207893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569480686080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |