Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 3e-12 >seq3 Length=2072284 Score = 87.8 bits (96), Expect = 3e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 171852 AGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGT 171911 || |||| || ||||| | ||| | ||| || || || || || || | || || Sbjct 540865 AGACGTAGAACCAAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGA 540806 Query 171912 TCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCT 171971 | || || | || || |||||||| || | | |||||||||||| || |||||||| Sbjct 540805 CCATCGTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGGAATTCCTTCC 540746 Query 171972 TTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTA 172031 || || || ||| | || ||| || || || || ||||||||||| ||| Sbjct 540745 TTGTCAGAGATCTTACTCTTGACAGCCTCAATGGTGTCGCTAGACTCTACTTCTAGCGTA 540686 Query 172032 ATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| || || ||||| || || ||||| |||||||| || Sbjct 540685 ATGGTCTTGCCCGTTAACGTCTTGATGAAAATCTGCATCTT 540645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135818972800