Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 2e-13 >seq1 Length=2987201 Score = 95.1 bits (104), Expect = 2e-13 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 |||||||| || || || |||| ||| | || || | |||||| | || || || || Sbjct 1206528 TGGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAG 1206469 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 ||||| || || || | || | ||| | ||||| | || ||| | | || Sbjct 1206468 GTTCCGTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTGAGCCCA 1206409 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || || ||||| | ||| |||||||||||||| | ||||| || ||||| || ||||| Sbjct 1206408 ATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCTCA 1206349 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGA 2073755 || || ||| ||||||||| | || |||||||| Sbjct 1206348 ATAGAATCGTCCTTCATGTTTACGAGGAAGCACGA 1206314 Score = 86.0 bits (94), Expect = 1e-10 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 2071852 ACGCGGCGCATAAACAGGTCGCACGTCCACAGG-CCGTAAAAGAGATCGCGCGCCCGGTT 2071910 ||||| ||| ||||| ||| |||| ||| || | ||| |||||||| || || | Sbjct 1206690 ACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAA-AGATCGCGTGCGCGAAT 1206632 Query 2071911 CTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGG 2071970 ||| ||||||||||| || || |||||||| |||||| | ||| | |||||||| Sbjct 1206631 CTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACACATCGTCATGCCACGG 1206572 Query 2071971 CTCCAGGTAGCAGGCAAAGGCGCC 2071994 ||| |||||| ||||||||| || Sbjct 1206571 CTCGAGGTAGATGGCAAAGGCACC 1206548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916244698007024