Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq3 118 8e-21
>seq3
Length=2072284
Score = 118 bits (130), Expect = 8e-21
Identities = 463/721 (64%), Gaps = 8/721 (1%)
Strand=Plus/Minus
Query 281755 AAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTC 281814
||| || || || |||| ||||||||| || ||||| || |||||||| || | ||
Sbjct 233422 AAGGATGGCAGCCTGAACAGCAGCACCGTAGGCAACGGCCTCATCAGGGTTGATAGAGCG 233363
Query 281815 ATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTAC-CTTAGGAATACGAG 281873
|| || | || ||| ||| |||| || || | ||| | ||| || |||||||
Sbjct 233362 GTTGAGCTCCTTGCCAGAGAAGAAATCACTAACGAGCT-TCTGAATCTTGGGGATACGAG 233304
Query 281874 ATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATA 281933
|| || ||||| | ||||| || || || | || || | | || | |||| |
Sbjct 233303 TGGAACCACCAACAAGCACAATCTCGTGAACGTCAGACTTGCCAACCTTGGCATCCTTGA 233244
Query 281934 AAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATT 281993
|| || || || || | || | || | ||| || | || ||||||
Sbjct 233243 GGACCTTCTCGACAGGAGAGATGGTAGAGCGGAAAAGATCTTGGCACATCTCCTCGAATC 233184
Query 281994 TAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATC 282052
||| | ||| | || | || || ||||| || || ||||||| || | |||||
Sbjct 233183 GAGCACGAGTGATAGA-AGTGTAGAAGTCAATACCCTCATACAAAGAGTCGATCTCAATA 233125
Query 282053 GTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTT 282112
| ||| || || || || || || || || || ||||| || ||||| || || || |
Sbjct 233124 GGAGTCTGGGTAGAGGAGGAGAGGGCGCGCTTGGCACGCTCGCATGCAGTTCTCAGACGG 233065
Query 282113 CGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAA 282170
|| | ||| |||| ||| | | | || | || || || | |||||| || |
Sbjct 233064 CGGAGGGCAC--GCTGGTTGCCAGTAATGTCCTTCTTGTACTTGCGCTTGAACTCCTGGG 233007
Query 282171 CACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACG 282230
| | | || ||||| || || ||||| ||||| ||||| | ||| | || | |
Sbjct 233006 CGAAGTGGTTGACCAGACGGTTGTCGAAATCCTCACCACCCAAGTGAGTGTCACCAGCGG 232947
Query 282231 TAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCAC 282290
| | | || | ||| | ||||| |||| ||| | || ||||| ||| ||||
Sbjct 232946 TGGACTTGACCTCGAAGATACCATCGTCAATGCTCAACAAAGAGACATCGAAGGTACCAC 232887
Query 282291 CACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACG 282350
|||||| || || || || ||||| || || || ||||| || || |
Sbjct 232886 CACCCAAGTCGAAGATGAGGACATTATGCTCACCAGAGCCCTTCTTGTCAAGGCCGTATG 232827
Query 282351 CAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTC 282410
||| ||||| ||||| || || || ||||| | | || || ||||||||||| |||
Sbjct 232826 CAATGGCAGCCGCAGTGGGCTCGTTGATAATACGAAGGACGTTGAGACCAGCAATGGTTC 232767
Query 282411 CTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGG 282470
| || || || ||||| || | || || ||||| || || ||||| ||||| || ||||
Sbjct 232766 CGGCGTCCTTGGTGGCCTGACGCTGAGAGTCGTTGAAGTAGGCAGGGACAGTGATGACGG 232707
Query 282471 C 282471
|
Sbjct 232706 C 232706
Score = 98.7 bits (108), Expect = 7e-15
Identities = 138/193 (72%), Gaps = 7/193 (4%)
Strand=Plus/Minus
Query 282284 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTT-----AT 282338
|| ||||| |||| ||| |||||||| || | | | || | || ||| || |
Sbjct 1756723 GTACCACCGCCCAAATCGAAAATAAGGACGTACTTCTCCTCCTC--GGTCTTACCAGCAC 1756666
Query 282339 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGAC 282398
||||||| || |||| ||||||||| || || || || ||||| | | ||||| || |
Sbjct 1756665 CAAGACCGTATGCAATAGCAGCAGCGGTAGGCTCGTTGATAATACGAAGGACATTGAGGC 1756606
Query 282399 CAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAA 282458
||||||| || ||||| || ||||| || | ||| || ||||| || || |||||||
Sbjct 1756605 CAGCAATGGAGCCAGCATCCTTGGTGGCCTGACGTTGAGAGTCGTTGAAGTAGGCAGGAA 1756546
Query 282459 CAGTAATAACGGC 282471
|||| | |||||
Sbjct 1756545 CAGTGACGACGGC 1756533
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740629614467616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |