Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 197 1e-45 seq2 111 2e-19 seq3 105 6e-18 >seq1 Length=2987201 Score = 197 bits (218), Expect = 1e-45 Identities = 1174/1857 (63%), Gaps = 75/1857 (4%) Strand=Plus/Minus Query 147941 AGCGGGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTC 148000 ||||| ||||||||||||||||||||| || |||||||| || | ||| ||||| Sbjct 1207906 AGCGGCTTGAGTGCGCAGATAGTACATACCGGTCTTGAGCCCTTTAGACCAGCCGTAGAA 1207847 Query 148001 GTGCACCGACGACATGAGCGTGTACGTCGGGTGCG---GCACAAACAGATTAAACGACTG 148057 ||||| || | ||| || | | | | | | ||| | | | || | ||| Sbjct 1207846 GTGCATACTCG---TAAGCTTGCCCATTGTGGGGGATTGCATATAGATGTTCAGACTCTG 1207790 Query 148058 GCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTCAT 148117 || ||||| ||||| | || | | |||||||||| || || | |||| | || Sbjct 1207789 ACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGATAATCACCTTTTGACTGAT 1207730 Query 148118 CTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCAC 148177 |||||| | |||||||| || |||| | ||| ||||| | ||| || | Sbjct 1207729 CTCCCAAACTGTCTTGTAGAGGTCTTTGAGGTCATCAGGAATCGAGGGAATGTCCTTAAT 1207670 Query 148178 CGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGAT 148237 |||||| | |||| | | || ||| ||||| | | ||| | |||| Sbjct 1207669 CGAGCCCCCAGAGGCAACGAGACGGTTCTTCATGTCGTCGTTCCAAAGGCCCATTTCGAC 1207610 Query 148238 CAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAG 148297 ||||| | | ||||| |||| || | ||| ||||| |||||||| || || ||| Sbjct 1207609 AAGGTCCTTCAAGAGATAAGGATTGACAATCTGGAACTCTCCGGCGAGAACACGGCGCGA 1207550 Query 148298 ATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGT 148357 || | || || | || || || | || |||| |||||||||||| | ||||| Sbjct 1207549 GTAGAAATTTGAGGTGTATGGCTCGAAGCATTCATTGTAGCCCAAAATCTGAGAGGTCGA 1207490 Query 148358 TGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCG 148417 || || ||||| || || | ||||| || || | ||| || | | Sbjct 1207489 CGCGGTAGGCATCGGAGCAACTAAGAGCGAATTACGAAGCCCGTACTTAGCCAGATCCGC 1207430 Query 148418 CTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAG 148477 |||||||| |||| ||||| ||| | || | || ||||| ||||| || Sbjct 1207429 CTTCAGAGTATCCCAATCCCAAAGCTCGGTGGGATTAACACCCCACAAATCGTAGGAAAG 1207370 Query 148478 AATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGT-GCGCCGCCGCCA 148536 || | || || ||||||||||| || || || |||| |||| | |||| Sbjct 1207369 CTCACCCTTGGAGGCAGGACTGCCCTCGTAAGACTCATAAGGACCGTCGCGCTGA-GCCA 1207311 Query 148537 GTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA 148596 || |||||| | || |||| ||| || ||||| || || ||||||| Sbjct 1207310 ACTCAATCGACGCCTCCACAGCTCCGTGGTAGATAGTCTCAAAGATCTGGACGTTGAGCT 1207251 Query 148597 GCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCT 148656 | |||| || ||| | || | |||||| | || || || ||||| || | Sbjct 1207250 CCTTCGCCTCTTCAGAGTCGAAAGGAAGGCGCAGCATGAAGAAGGCATCAGCAAGACCTT 1207191 Query 148657 GTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGA 148715 | || |||| | ||||||| || || ||||| || || || || ||| || | || Sbjct 1207190 GGACACCCAGGGCAATGGGGCGATGACGCATGTTAGACAGACGAGC-CTCAGGAACTGGG 1207132 Query 148716 TAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTGTAATTCTGCG 148774 || | ||| ||||||||| |||| |||| || || | |||||| || ||| | Sbjct 1207131 TAATAGTTTTTGTCGATGATGTTGTTCAAG-TTCCGAGTAATCACCTTGACAACGCTGTG 1207073 Query 148775 CAGC------AATTCAAAATCGTACTTGTCATCTACGATGC------ATCGGTTCACGGC 148822 || || ||||| | ||||| ||||| | ||| || || || Sbjct 1207072 AAGACTCTTGAAGTCAAACT-GTACTC--CATCTTCC-TGCGTTTTAATAAAAGCAGGGA 1207017 Query 148823 G----ATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCT 148878 | | |||||| || |||||||| || ||||| || |||| ||||| || || | Sbjct 1207016 GGGCTACAGAGGCAAGGTTGCACACAGCAGTCTCCTCAGGGGATGAATACTCAACAATTT 1206957 Query 148879 CGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGC 148938 || |||| |||| || ||||| || | ||||| || |||||||||| |||| Sbjct 1206956 CGCAACACAAATTGGAGCTCTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGG 1206897 Query 148939 ACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GA 148995 || |||||||| |||||| | || ||||| || ||| | || | || | Sbjct 1206896 CAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGT 1206837 Query 148996 ACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT------CCTGCTCGT 149049 ||| | || | ||| || ||| || | | || |||| ||| || | Sbjct 1206836 ACCAAAGC---TTCTGAGC-----CTTTATGGTACGA-CGGCCCTTTCCAGCCTTTTCAT 1206786 Query 149050 A--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTT 149107 | | ||| | |||| || || | || ||||| || | || || ||||| | Sbjct 1206785 ACTTCTCGTAAAGAGCC--TCAAATTCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTC 1206728 Query 149108 GTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGG 149167 || |||||||| || | ||| | | ||||| | ||||||||||| ||||||||||| Sbjct 1206727 GTTGGGGCACATAAGTGTCCAATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGG 1206668 Query 149168 CACCCAGAGCGCGTACATGA---GGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCG 149224 | ||| || || ||||| | ||||| || ||||| ||| || Sbjct 1206667 AATCCAAAGGGC---CATGAAAAGATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTT 1206611 Query 149225 GCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGC 149284 |||||||| || | | ||| | || | ||||||||||| | ||| | || | || Sbjct 1206610 GCGCAGGTCGATAAAGTCGAACACATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGC 1206551 Query 149285 GCCCTTGCGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAAC 149341 || |||||| || || |||||||||| || | ||||||| |||| || | Sbjct 1206550 ACCAGGACGCTTGTTCCCACCTTGGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAA 1206491 Query 149342 CATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAG-AGCTA-ATGCGACTGCCGCGCGCT 149399 ||| || ||| ||| | | || ||||| ||| ||||| || || ||| || Sbjct 1206490 CATGGGAAGAATCCCATTCGAGGTTCCGTTCGTACCAGCTATATATGA--GCCAGTAGCG 1206433 Query 149400 CGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAG-TC 149458 || | || ||||| ||| || || || ||| | |||| |||||| ||||||| || Sbjct 1206432 CGGATGTTATGCACACTGAGCCCAATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTC 1206373 Query 149459 GCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGA 149518 | || || ||| || ||||| || ||| ||||||| | | || |||||||| Sbjct 1206372 TTC-AGAGTATCGTAAATACCCTCAATAGAATCGTCCTTCATGTTTACGAGGAAGCACGA 1206314 Query 149519 GCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATA 149578 || ||| || || | || || || | ||| |||||| |||||| || || || Sbjct 1206313 GCTCATCTGAGGCTTTGGAGTTCCTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAAGTA 1206254 Query 149579 TTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCC 149638 ||| | | ||| | | ||| | ||| | || | |||||||||||||| || || Sbjct 1206253 TTTGTTGGACATAAGGTTGTAAGTCTCTACGACTTTGGGTATGTCATCGCCATGAATACC 1206194 Query 149639 TATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCA---ATTTT 149695 |||| ||||||||| | ||||||||| || ||||| ||| |||||| | ||| Sbjct 1206193 AATGGAGACGCGCATGATCATATGCTGAGGGCGCTCGTGAACT---TTTCCATTTAGTTT 1206137 Query 149696 GAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCG 149752 ||||||||| | ||||| || ||| | ||||| || ||||| | ||||| || Sbjct 1206136 CAGCAAGTAGGAGCGCTCTAGCGTTTTGAAACCAAAATAGTTGTAATTGAAGTCACG 1206080 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| || | ||| | | | || |||||||||||||| Sbjct 2570372 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCGTCGAGCTGCTTGCC 2570314 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || || ||||||||||||||| ||||||| ||| Sbjct 2570313 GGCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCGCTGATCTTGCTCTT 2570254 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | ||| | ||||||| | | ||| || || | ||||| || || || || || || Sbjct 2570253 CACAGCCTCGATCGTGTCGCTAGACTCGACCTCAAGGGTGATAGTCTTCCCCGTGAGGGT 2570194 Query 133643 TTTTACGAAAATCTGCAT 133660 || | ||| |||||||| Sbjct 2570193 CTTGATGAAGATCTGCAT 2570176 >seq2 Length=2890200 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | ||| | | | || || ||||||||||| Sbjct 724353 GTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCA-TCATCAAGCTGCTTGCC 724411 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || |||||||| ||||| ||| ||||||| ||| Sbjct 724412 GGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCGCTGATCTTGCTCTT 724471 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | ||| | ||||| | | |||||| |||| ||| | || || || ||||| || Sbjct 724472 CACAGCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAATAGTCTTACCCGTCAGGGT 724531 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| | ||| |||||||| Sbjct 724532 TTTAATGAAGATCTGCAT 724549 >seq3 Length=2072284 Score = 105 bits (116), Expect = 6e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | |||||||| || || || ||||| ||| | || ||| | || || || Sbjct 540853 AAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGACCA-TCGTCAAG 540795 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | ||||| ||||| ||||| || || || ||||||||||| | ||| Sbjct 540794 CTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGGAATTCCTTCCTTGTCAGAGAT 540735 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| ||||| |||||| | | ||| || || | || | ||| ||||| Sbjct 540734 CTTACTCTTGACAGCCTCAATGGTGTCGCTAGACTCTACTTCTAGCGTAATGGTCTTGCC 540675 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || | || || | |||||||||||| Sbjct 540674 CGTTAACGTCTTGATGAAAATCTGCAT 540648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420703315840