Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq1 197 1e-45
seq2 111 2e-19
seq3 105 6e-18
>seq1
Length=2987201
Score = 197 bits (218), Expect = 1e-45
Identities = 1174/1857 (63%), Gaps = 75/1857 (4%)
Strand=Plus/Minus
Query 147941 AGCGGGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTC 148000
||||| ||||||||||||||||||||| || |||||||| || | ||| |||||
Sbjct 1207906 AGCGGCTTGAGTGCGCAGATAGTACATACCGGTCTTGAGCCCTTTAGACCAGCCGTAGAA 1207847
Query 148001 GTGCACCGACGACATGAGCGTGTACGTCGGGTGCG---GCACAAACAGATTAAACGACTG 148057
||||| || | ||| || | | | | | | ||| | | | || | |||
Sbjct 1207846 GTGCATACTCG---TAAGCTTGCCCATTGTGGGGGATTGCATATAGATGTTCAGACTCTG 1207790
Query 148058 GCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTCAT 148117
|| ||||| ||||| | || | | |||||||||| || || | |||| | ||
Sbjct 1207789 ACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGATAATCACCTTTTGACTGAT 1207730
Query 148118 CTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCAC 148177
|||||| | |||||||| || |||| | ||| ||||| | ||| || |
Sbjct 1207729 CTCCCAAACTGTCTTGTAGAGGTCTTTGAGGTCATCAGGAATCGAGGGAATGTCCTTAAT 1207670
Query 148178 CGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGAT 148237
|||||| | |||| | | || ||| ||||| | | ||| | ||||
Sbjct 1207669 CGAGCCCCCAGAGGCAACGAGACGGTTCTTCATGTCGTCGTTCCAAAGGCCCATTTCGAC 1207610
Query 148238 CAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAG 148297
||||| | | ||||| |||| || | ||| ||||| |||||||| || || |||
Sbjct 1207609 AAGGTCCTTCAAGAGATAAGGATTGACAATCTGGAACTCTCCGGCGAGAACACGGCGCGA 1207550
Query 148298 ATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGT 148357
|| | || || | || || || | || |||| |||||||||||| | |||||
Sbjct 1207549 GTAGAAATTTGAGGTGTATGGCTCGAAGCATTCATTGTAGCCCAAAATCTGAGAGGTCGA 1207490
Query 148358 TGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCG 148417
|| || ||||| || || | ||||| || || | ||| || | |
Sbjct 1207489 CGCGGTAGGCATCGGAGCAACTAAGAGCGAATTACGAAGCCCGTACTTAGCCAGATCCGC 1207430
Query 148418 CTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAG 148477
|||||||| |||| ||||| ||| | || | || ||||| ||||| ||
Sbjct 1207429 CTTCAGAGTATCCCAATCCCAAAGCTCGGTGGGATTAACACCCCACAAATCGTAGGAAAG 1207370
Query 148478 AATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGT-GCGCCGCCGCCA 148536
|| | || || ||||||||||| || || || |||| |||| | ||||
Sbjct 1207369 CTCACCCTTGGAGGCAGGACTGCCCTCGTAAGACTCATAAGGACCGTCGCGCTGA-GCCA 1207311
Query 148537 GTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA 148596
|| |||||| | || |||| ||| || ||||| || || |||||||
Sbjct 1207310 ACTCAATCGACGCCTCCACAGCTCCGTGGTAGATAGTCTCAAAGATCTGGACGTTGAGCT 1207251
Query 148597 GCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCT 148656
| |||| || ||| | || | |||||| | || || || ||||| || |
Sbjct 1207250 CCTTCGCCTCTTCAGAGTCGAAAGGAAGGCGCAGCATGAAGAAGGCATCAGCAAGACCTT 1207191
Query 148657 GTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGA 148715
| || |||| | ||||||| || || ||||| || || || || ||| || | ||
Sbjct 1207190 GGACACCCAGGGCAATGGGGCGATGACGCATGTTAGACAGACGAGC-CTCAGGAACTGGG 1207132
Query 148716 TAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTGTAATTCTGCG 148774
|| | ||| ||||||||| |||| |||| || || | |||||| || ||| |
Sbjct 1207131 TAATAGTTTTTGTCGATGATGTTGTTCAAG-TTCCGAGTAATCACCTTGACAACGCTGTG 1207073
Query 148775 CAGC------AATTCAAAATCGTACTTGTCATCTACGATGC------ATCGGTTCACGGC 148822
|| || ||||| | ||||| ||||| | ||| || || ||
Sbjct 1207072 AAGACTCTTGAAGTCAAACT-GTACTC--CATCTTCC-TGCGTTTTAATAAAAGCAGGGA 1207017
Query 148823 G----ATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCT 148878
| | |||||| || |||||||| || ||||| || |||| ||||| || || |
Sbjct 1207016 GGGCTACAGAGGCAAGGTTGCACACAGCAGTCTCCTCAGGGGATGAATACTCAACAATTT 1206957
Query 148879 CGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGC 148938
|| |||| |||| || ||||| || | ||||| || |||||||||| ||||
Sbjct 1206956 CGCAACACAAATTGGAGCTCTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGG 1206897
Query 148939 ACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GA 148995
|| |||||||| |||||| | || ||||| || ||| | || | || |
Sbjct 1206896 CAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGT 1206837
Query 148996 ACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT------CCTGCTCGT 149049
||| | || | ||| || ||| || | | || |||| ||| || |
Sbjct 1206836 ACCAAAGC---TTCTGAGC-----CTTTATGGTACGA-CGGCCCTTTCCAGCCTTTTCAT 1206786
Query 149050 A--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTT 149107
| | ||| | |||| || || | || ||||| || | || || ||||| |
Sbjct 1206785 ACTTCTCGTAAAGAGCC--TCAAATTCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTC 1206728
Query 149108 GTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGG 149167
|| |||||||| || | ||| | | ||||| | ||||||||||| |||||||||||
Sbjct 1206727 GTTGGGGCACATAAGTGTCCAATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGG 1206668
Query 149168 CACCCAGAGCGCGTACATGA---GGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCG 149224
| ||| || || ||||| | ||||| || ||||| ||| ||
Sbjct 1206667 AATCCAAAGGGC---CATGAAAAGATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTT 1206611
Query 149225 GCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGC 149284
|||||||| || | | ||| | || | ||||||||||| | ||| | || | ||
Sbjct 1206610 GCGCAGGTCGATAAAGTCGAACACATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGC 1206551
Query 149285 GCCCTTGCGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAAC 149341
|| |||||| || || |||||||||| || | ||||||| |||| || |
Sbjct 1206550 ACCAGGACGCTTGTTCCCACCTTGGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAA 1206491
Query 149342 CATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAG-AGCTA-ATGCGACTGCCGCGCGCT 149399
||| || ||| ||| | | || ||||| ||| ||||| || || ||| ||
Sbjct 1206490 CATGGGAAGAATCCCATTCGAGGTTCCGTTCGTACCAGCTATATATGA--GCCAGTAGCG 1206433
Query 149400 CGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAG-TC 149458
|| | || ||||| ||| || || || ||| | |||| |||||| ||||||| ||
Sbjct 1206432 CGGATGTTATGCACACTGAGCCCAATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTC 1206373
Query 149459 GCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGA 149518
| || || ||| || ||||| || ||| ||||||| | | || ||||||||
Sbjct 1206372 TTC-AGAGTATCGTAAATACCCTCAATAGAATCGTCCTTCATGTTTACGAGGAAGCACGA 1206314
Query 149519 GCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATA 149578
|| ||| || || | || || || | ||| |||||| |||||| || || ||
Sbjct 1206313 GCTCATCTGAGGCTTTGGAGTTCCTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAAGTA 1206254
Query 149579 TTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCC 149638
||| | | ||| | | ||| | ||| | || | |||||||||||||| || ||
Sbjct 1206253 TTTGTTGGACATAAGGTTGTAAGTCTCTACGACTTTGGGTATGTCATCGCCATGAATACC 1206194
Query 149639 TATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCA---ATTTT 149695
|||| ||||||||| | ||||||||| || ||||| ||| |||||| | |||
Sbjct 1206193 AATGGAGACGCGCATGATCATATGCTGAGGGCGCTCGTGAACT---TTTCCATTTAGTTT 1206137
Query 149696 GAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCG 149752
||||||||| | ||||| || ||| | ||||| || ||||| | ||||| ||
Sbjct 1206136 CAGCAAGTAGGAGCGCTCTAGCGTTTTGAAACCAAAATAGTTGTAATTGAAGTCACG 1206080
Score = 116 bits (128), Expect = 4e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| || | ||| | | | || ||||||||||||||
Sbjct 2570372 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCGTCGAGCTGCTTGCC 2570314
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || ||||||||||| || || ||||||||||||||| ||||||| |||
Sbjct 2570313 GGCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCGCTGATCTTGCTCTT 2570254
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| ||| | ||||||| | | ||| || || | ||||| || || || || || ||
Sbjct 2570253 CACAGCCTCGATCGTGTCGCTAGACTCGACCTCAAGGGTGATAGTCTTCCCCGTGAGGGT 2570194
Query 133643 TTTTACGAAAATCTGCAT 133660
|| | ||| ||||||||
Sbjct 2570193 CTTGATGAAGATCTGCAT 2570176
>seq2
Length=2890200
Score = 111 bits (122), Expect = 2e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| | ||| | | | || || |||||||||||
Sbjct 724353 GTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCA-TCATCAAGCTGCTTGCC 724411
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || ||||||||||| || |||||||| ||||| ||| ||||||| |||
Sbjct 724412 GGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCGCTGATCTTGCTCTT 724471
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| ||| | ||||| | | |||||| |||| ||| | || || || ||||| ||
Sbjct 724472 CACAGCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAATAGTCTTACCCGTCAGGGT 724531
Query 133643 TTTTACGAAAATCTGCAT 133660
||| | ||| ||||||||
Sbjct 724532 TTTAATGAAGATCTGCAT 724549
>seq3
Length=2072284
Score = 105 bits (116), Expect = 6e-18
Identities = 149/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | |||||||| || || || ||||| ||| | || ||| | || || ||
Sbjct 540853 AAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGACCA-TCGTCAAG 540795
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| || | ||||| ||||| ||||| || || || ||||||||||| | |||
Sbjct 540794 CTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGGAATTCCTTCCTTGTCAGAGAT 540735
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| ||||| |||||| | | ||| || || | || | ||| |||||
Sbjct 540734 CTTACTCTTGACAGCCTCAATGGTGTCGCTAGACTCTACTTCTAGCGTAATGGTCTTGCC 540675
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| | || || | ||||||||||||
Sbjct 540674 CGTTAACGTCTTGATGAAAATCTGCAT 540648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420703315840
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