Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 seq2 98.7 7e-16 >seq1 Length=2987201 Score = 104 bits (114), Expect = 2e-17 Identities = 164/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | || | |||||| || || ||| ||| || || |||||||| || | Sbjct 2570404 CACCACCACGAAGGCGAAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAG 2570345 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 |||| ||||| | ||||| | || || ||||| || |||| ||||||||| || ||| Sbjct 2570344 AGAGGGTGCGGCCATCGTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCG 2570285 Query 33641 GCACACCTTCTTTGTCGGCAATTTT-CTGTTTCAACATAGTCACG---GTGTCGCTTGAT 33696 | | ||||| |||||| || || || || || || | || |||||||| || Sbjct 2570284 GAATGCCTTCCTTGTCGCTGATCTTGCTCTT----CACAGCCTCGATCGTGTCGCTAGAC 2570229 Query 33697 TCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || |||| ||||| || || || || | || || | ||||||||||| Sbjct 2570228 TCGACCTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGATGAAGATCTGCAT 2570176 >seq2 Length=2890200 Score = 98.7 bits (108), Expect = 7e-16 Identities = 163/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | ||| | |||||| || ||||| ||| || || |||||||| |||| Sbjct 724321 CACCACCACGGAGACGGAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGG 724380 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || ||||| | || || | || || ||||| || |||| ||||||||| || ||| Sbjct 724381 AAAGGGTGCGGCCATCATCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCG 724440 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | || || || ||| || || |||| || || | |||||| || || ||| Sbjct 724441 GGATGCCCTCCTTATCGCTGATCTTGCTCTTCA-CAGCCTCGATGGTGTCACTCGACTCC 724499 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 || || | || || || ||||| || | ||||| | ||||||||||| || Sbjct 724500 ACCTCGAGGGTAATAGTCTTACCCGTCAGGGTTTTAATGAAGATCTGCATCGT 724552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703935902720