Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq2 131 2e-25
seq1 122 8e-23
>seq2
Length=2890200
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | ||| |||||| ||||||||||| ||||
Sbjct 724323 CCACCACGGAGACGGAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAA 724382
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || | || || |||||||| || || || |||| ||||||||||| | ||
Sbjct 724383 AGGGTGCGGCCATCATCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGG 724442
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || |||||| || ||||||| ||||| || | | ||||| ||||| ||||||
Sbjct 724443 ATGCCCTCCTTATCGCTGATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCACC 724502
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | || || || |||||||||| ||||| | || ||||||||
Sbjct 724503 TCGAGGGTAATAGTCTTACCCGTCAGGGTTTTAATGAAGATCTGCAT 724549
>seq1
Length=2987201
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | ||| |||||| || |||||||| || |
Sbjct 2570402 CCACCACGAAGGCGAAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAG 2570343
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || | ||||| |||||||| || || || |||| ||||||||||| | |||
Sbjct 2570342 AGGGTGCGGCCATCGTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGA 2570283
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || |||||||| ||||||| ||||| || | | ||||||||| || || |||
Sbjct 2570282 ATGCCTTCCTTGTCGCTGATCTTGCTCTTCACAGCCTCGATCGTGTCGCTAGACTCGACC 2570223
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| || || ||||| | || || | || ||||||||
Sbjct 2570222 TCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGATGAAGATCTGCAT 2570176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793509841280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |