Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1 259 7e-64 >seq1 Length=2987201 Score = 259 bits (286), Expect = 7e-64 Identities = 745/1135 (66%), Gaps = 22/1135 (2%) Strand=Plus/Minus Query 69349 TTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATA 69408 ||||| || || ||||| | ||| || ||||| ||| || |||||||| || || Sbjct 1206936 TTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCATG 1206877 Query 69409 AACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTT 69468 || || ||||||| || |||||| || | ||||| | ||||| | ||| ||| Sbjct 1206876 AAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAAGCTTCTGAGCCTTT 1206817 Query 69469 ATT-----ACGGTCTTGTAACGCTTCTCTTTTTCATA-TTGT-GTATATAGCCGTTCGAA 69521 || |||| | | | || | ||||||| || | ||| | |||| || || Sbjct 1206816 ATGGTACGACGGCCCTTTCCAGCCT-----TTTCATACTTCTCGTAAAGAGCC--TCAAA 1206764 Query 69522 TTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACAC 69581 ||||||||| |||| ||| | | ||||| ||||| || || ||||| | || ||| | Sbjct 1206763 TTCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTCCAATC 1206704 Query 69582 ATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATC 69641 | |||| | || || || ||||| || ||||||||||||||||| || || || ||||| Sbjct 1206703 AGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAAGATC 1206644 Query 69642 TCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATC 69701 | | | | | ||||| || || |||||| || |||| ||| || | | ||| Sbjct 1206643 GCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACACATC 1206584 Query 69702 AGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATC 69761 |||||| || || || || || || | | | || || || || || || || || || Sbjct 1206583 GTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTTGGTC 1206524 Query 69762 TATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACC 69821 | ||| | |||||||| || || || | || ||| |||| ||| ||||| || | || Sbjct 1206523 GACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAGGTTCC 1206464 Query 69822 ATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCC 69881 || || |||| ||||| || | ||||| || ||| | | || || || || Sbjct 1206463 GTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTGAGCCCAATCCC 1206404 Query 69882 TCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCT 69941 || || || ||||| || || || | |||| || || || |||||||| || Sbjct 1206403 ACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCTCAATAGA 1206344 Query 69942 ATCATCTATCATGTTAAGAAGAAAACAGCTAG-ACATTTGATGATGTATAGTTCCCGCAT 70000 ||| || ||||||| | || || || | || ||| ||| | | | |||||| |||| Sbjct 1206343 ATCGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTTCCTGCAT 1206285 Query 70001 TAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAA 70060 | | || || || || ||||| ||||| |||| | || | || ||||| || || | Sbjct 1206284 TGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAAGTCTCTA 1206225 Query 70061 TAGCTGATTCTATATCCCACTG--ATGAATTCCTATCGCGACACGCATCAACATATGCTG 70118 || || ||| || | |||||| || || | ||| ||||| | ||||||||| Sbjct 1206224 CGACT--TTGGGTATGTCATCGCCATGAATACCAATGGAGACGCGCATGATCATATGCTG 1206167 Query 70119 AGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAA 70178 ||| || || ||| ||||| ||||| || ||| || || || ||||| || Sbjct 1206166 AGGGCGCTCGTGAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGCGTTTTGAA 1206107 Query 70179 CCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTT 70238 |||||||||||||| ||||| | || |||| || |||| || || | || Sbjct 1206106 ACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGCTCTTCAGC 1206047 Query 70239 ATATTTGGTAACTATATC-CATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTT 70297 || || || | || ||| | | || || || || ||||| | || |||| Sbjct 1206046 ATGCTTCTGGACAACGTCGTATACCTCTTGG-GAAATCATTGGAGAATGCTTGTCATTGC 1205988 Query 70298 TAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCT 70357 |||||| |||||| ||| | ||| || || || | || || | ||||||||| | | Sbjct 1205987 GAGGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTTTTTTTGTCTGTT 1205928 Query 70358 TGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAG 70417 |||| | ||| || | || |||| || || || ||||||||||| || |||| Sbjct 1205927 TGTGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAGGGTGGACCGTAG 1205868 Query 70418 TACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCC 70472 | | || ||| | || ||||| | |||| | ||| || || || || || Sbjct 1205867 TCATTGACGCAGCTGTCTCGGCAGCCAGGTTATCGAGTTCGATGGTGGTCACGCC 1205813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908662618240