Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1 210 3e-49 >seq1 Length=2987201 Score = 210 bits (232), Expect = 3e-49 Identities = 1111/1754 (63%), Gaps = 55/1754 (3%) Strand=Plus/Minus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422 || ||||||||||| ||||||||||| |||| ||| |||| | |||||| | Sbjct 1207893 CGCAGATAGTACATACCGGTCTTGAGCCCTTTAGACCAGCCGTAGAAGTGCATACTCGTA 1207834 Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAG 110482 |||||| ||| || || || ||| ||| ||||| ||| ||||||||||| ||||| Sbjct 1207833 AGCTTGCCCATTGTGGGGGATTGCATATAGATGTTCAGACTCTGACTTTGGTCGATGAAA 1207774 Query 110483 CGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGA 110542 | || | || |||||||| || | |||| | || ||||||||||| Sbjct 1207773 GGTCCTCTGCCAGCGGCCATATCGATAATCACCTTTTGACTGATCTCCCAAACTGTCTTG 1207714 Query 110543 TAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTC 110602 ||||| | |||| ||||| || || | || | || || || ||||| | Sbjct 1207713 TAGAGGTCTTTGAGGTCATCAGGAATCGAGGGAATGTCCTTAATCGAGCCCCCAGAGGCA 1207654 Query 110603 ACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGG 110662 || | | | |||||| || | | ||| || || || | ||||| || | ||| Sbjct 1207653 ACGAGACGGTTCTTCATGTCGTCGTTCCAAAGGCCCATTTCGACAAGGTCCTTCAAGAGA 1207594 Query 110663 TGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTG 110722 | |||||||| ||||| || ||||| | | | ||||| |||| ||| Sbjct 1207593 TAAGGATTGACAATCTGGAACTCTCCGGCGAGAACACGGCGCGAGTAGAAATTTGAGGTG 1207534 Query 110723 TATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGT 110782 ||||| || ||||||||||| | ||||| || || | ||| || || || ||||| || Sbjct 1207533 TATGGCTCGAAGCATTCATTGTAGCCCAAAATCTGAGAGGTCGACGCGGTAGGCATCGGA 1207474 Query 110783 GCCATCAAAAGACTGTTACGAAGACCCTTCTC--CTTGATGCGTTCCTTGAGAACATCCC 110840 || | || || |||||||| || | || | ||| || |||| ||| ||||| Sbjct 1207473 GCAACTAAGAGCGAATTACGAAGCCCGTACTTAGCCAGATCCG--CCTTCAGAGTATCCC 1207416 Query 110841 AGTCGTAGTTGAGCTTGGTT---TCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGG 110897 | || | |||| ||| | | | |||||| || | |||| | || | || Sbjct 1207415 AATCCCAA---AGCTCGGTGGGATTAACACCCCACAAATCGTAGGAAAGCTCACCCTTGG 1207359 Query 110898 ACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCG 110957 | || ||| ||||| | | ||||| | ||| | | | |||||| ||| || Sbjct 1207358 AGGCAGGACTGCCCTCGTAAGACTCATAAGGACCGTCGCGCTGAGCCAACTCAATCGACG 1207299 Query 110958 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 111017 |||||| | | |||| || || || |||||||| | | || | |||||| || || | Sbjct 1207298 CCTCCACAGCTCCGTGGTAGATAGTCTCAAAGATCTGGACGTTGAGCTCCTTCGCCTCTT 1207239 Query 111018 CTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAA 111076 | || || || | | || ||| || | || |||| || |||||||| ||||||| Sbjct 1207238 CAGAGTCGAAAG-GAAGGCGCAGCATGAAGAAGGCATCAGCAAGACCTTGGACACCCAGG 1207180 Query 111077 CCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTT 111133 |||| || | || ||||| |||||| || || |||| || || ||| | ||| Sbjct 1207179 GCAATGGGGCGATGACGCATGTTAGACAGACGAGC---CTCAGGAACTGGGTAATAGTTT 1207123 Query 111134 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 111193 |||| |||| ||| | || |||| | ||| | ||||| | | Sbjct 1207122 TTGTCGATGATGTTGTTCAAGTTCCGAGTAATCACCTTGACAACGCTGTGAAGACTCTTG 1207063 Query 111194 TAATCAAAAGTGCGAGTC--TCTTCAT------TGACATACTTTGGAAGGGCGATTGATG 111245 | ||||| || | || ||||| | | | | | || ||||| | || | Sbjct 1207062 AAGTCAAAC-TGT-ACTCCATCTTCCTGCGTTTTAATAAAAGCAGGGAGGGCTACAGAGG 1207005 Query 111246 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGT 111305 | | ||||| ||||| ||||| || || ||||| | |||||| ||| || | Sbjct 1207004 CAAGGTTGCACACAGCAGTCTCCTCAGGGGATGAATACTCAACAATTTCGCAACACAAAT 1206945 Query 111306 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGT 111365 |||| ||||| || || || | |||||| ||||| ||||| |||| |||||||||| Sbjct 1206944 TGGAGCTCTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGT 1206885 Query 111366 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCG 111424 |||||||| |||| | || ||||| ||||| | | |||||||| | ||||| | || Sbjct 1206884 AGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAAGCTTCT 1206825 Query 111425 GCGGC----TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGC 111480 | | | |||||| | ||| || ||| || || ||||| ||| || || Sbjct 1206824 GAGCCTTTATGGTACGACGGC-----CCTTTCCAGCCTTTTCATACTTCTCGTAAAGAGC 1206770 Query 111481 TTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAG 111539 ||||| || || || |||| | || || || || || || || || | ||| | Sbjct 1206769 CTCAAATTCATCTCCGTAAACGTCAGCAAGGCCAGG-GCATTCGTTGGGGCACATAAGTG 1206711 Query 111540 ACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG--ATGA 111597 ||| | | || | | | || ||||||||||| || || |||||||| |||| |||| Sbjct 1206710 TCCAATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGA 1206651 Query 111598 AAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTC 111657 || ||||| | ||| |||||| | || || || || | || | || || Sbjct 1206650 AA--AGATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTC 1206593 Query 111658 CATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACG------ 111711 | | ||| | ||||| ||||| || |||| || | | || |||| Sbjct 1206592 GAACACATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACC---AGGACGCTTGTT 1206536 Query 111712 CCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACC 111771 |||| |||| | || || || || ||| ||| | || || | ||| |||| ||| || Sbjct 1206535 CCCACCTTGGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCC 1206476 Query 111772 ATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTG 111831 || || || || || || ||| || | | || | | | ||| | Sbjct 1206475 ATTCGAGGTTCCGTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACT 1206416 Query 111832 CATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGAT 111891 | |||||| || || || |||| ||||| |||| || | | ||||| | || || Sbjct 1206415 GAGCCCAATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAAT 1206356 Query 111892 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGG 111951 ||| | || || || ||||| || | |||||||| | |||||| || |||| Sbjct 1206355 ACCCTCAATAGAATCGTCCTTCATGTTTACGAGGAAGCACGAGCTCATCTGAGGCTTTGG 1206296 Query 111952 TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGT 112010 || || |||||| | | ||| || | ||||| |||| || | | |||||| || Sbjct 1206295 AGTTCCTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAA-GTATTTGTTGGACATAAGGT 1206237 Query 112011 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGA 112070 ||| ||||| | ||| ||||| || || || || || || | ||| ||||||| Sbjct 1206236 TGTAAGTCTCTACGACTTTGGGTATGTCATCGCCATGAATACCAATGGAGACGCGCATGA 1206177 Query 112071 ACATGTACTGTGGG 112084 ||| | ||| ||| Sbjct 1206176 TCATATGCTGAGGG 1206163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031874393600