Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1 210 3e-49
>seq1
Length=2987201
Score = 210 bits (232), Expect = 3e-49
Identities = 1111/1754 (63%), Gaps = 55/1754 (3%)
Strand=Plus/Minus
Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422
|| ||||||||||| ||||||||||| |||| ||| |||| | |||||| |
Sbjct 1207893 CGCAGATAGTACATACCGGTCTTGAGCCCTTTAGACCAGCCGTAGAAGTGCATACTCGTA 1207834
Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAG 110482
|||||| ||| || || || ||| ||| ||||| ||| ||||||||||| |||||
Sbjct 1207833 AGCTTGCCCATTGTGGGGGATTGCATATAGATGTTCAGACTCTGACTTTGGTCGATGAAA 1207774
Query 110483 CGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGA 110542
| || | || |||||||| || | |||| | || |||||||||||
Sbjct 1207773 GGTCCTCTGCCAGCGGCCATATCGATAATCACCTTTTGACTGATCTCCCAAACTGTCTTG 1207714
Query 110543 TAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTC 110602
||||| | |||| ||||| || || | || | || || || ||||| |
Sbjct 1207713 TAGAGGTCTTTGAGGTCATCAGGAATCGAGGGAATGTCCTTAATCGAGCCCCCAGAGGCA 1207654
Query 110603 ACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGG 110662
|| | | | |||||| || | | ||| || || || | ||||| || | |||
Sbjct 1207653 ACGAGACGGTTCTTCATGTCGTCGTTCCAAAGGCCCATTTCGACAAGGTCCTTCAAGAGA 1207594
Query 110663 TGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTG 110722
| |||||||| ||||| || ||||| | | | ||||| |||| |||
Sbjct 1207593 TAAGGATTGACAATCTGGAACTCTCCGGCGAGAACACGGCGCGAGTAGAAATTTGAGGTG 1207534
Query 110723 TATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGT 110782
||||| || ||||||||||| | ||||| || || | ||| || || || ||||| ||
Sbjct 1207533 TATGGCTCGAAGCATTCATTGTAGCCCAAAATCTGAGAGGTCGACGCGGTAGGCATCGGA 1207474
Query 110783 GCCATCAAAAGACTGTTACGAAGACCCTTCTC--CTTGATGCGTTCCTTGAGAACATCCC 110840
|| | || || |||||||| || | || | ||| || |||| ||| |||||
Sbjct 1207473 GCAACTAAGAGCGAATTACGAAGCCCGTACTTAGCCAGATCCG--CCTTCAGAGTATCCC 1207416
Query 110841 AGTCGTAGTTGAGCTTGGTT---TCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGG 110897
| || | |||| ||| | | | |||||| || | |||| | || | ||
Sbjct 1207415 AATCCCAA---AGCTCGGTGGGATTAACACCCCACAAATCGTAGGAAAGCTCACCCTTGG 1207359
Query 110898 ACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCG 110957
| || ||| ||||| | | ||||| | ||| | | | |||||| ||| ||
Sbjct 1207358 AGGCAGGACTGCCCTCGTAAGACTCATAAGGACCGTCGCGCTGAGCCAACTCAATCGACG 1207299
Query 110958 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 111017
|||||| | | |||| || || || |||||||| | | || | |||||| || || |
Sbjct 1207298 CCTCCACAGCTCCGTGGTAGATAGTCTCAAAGATCTGGACGTTGAGCTCCTTCGCCTCTT 1207239
Query 111018 CTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAA 111076
| || || || | | || ||| || | || |||| || |||||||| |||||||
Sbjct 1207238 CAGAGTCGAAAG-GAAGGCGCAGCATGAAGAAGGCATCAGCAAGACCTTGGACACCCAGG 1207180
Query 111077 CCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTT 111133
|||| || | || ||||| |||||| || || |||| || || ||| | |||
Sbjct 1207179 GCAATGGGGCGATGACGCATGTTAGACAGACGAGC---CTCAGGAACTGGGTAATAGTTT 1207123
Query 111134 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 111193
|||| |||| ||| | || |||| | ||| | ||||| | |
Sbjct 1207122 TTGTCGATGATGTTGTTCAAGTTCCGAGTAATCACCTTGACAACGCTGTGAAGACTCTTG 1207063
Query 111194 TAATCAAAAGTGCGAGTC--TCTTCAT------TGACATACTTTGGAAGGGCGATTGATG 111245
| ||||| || | || ||||| | | | | | || ||||| | || |
Sbjct 1207062 AAGTCAAAC-TGT-ACTCCATCTTCCTGCGTTTTAATAAAAGCAGGGAGGGCTACAGAGG 1207005
Query 111246 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGT 111305
| | ||||| ||||| ||||| || || ||||| | |||||| ||| || |
Sbjct 1207004 CAAGGTTGCACACAGCAGTCTCCTCAGGGGATGAATACTCAACAATTTCGCAACACAAAT 1206945
Query 111306 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGT 111365
|||| ||||| || || || | |||||| ||||| ||||| |||| ||||||||||
Sbjct 1206944 TGGAGCTCTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGT 1206885
Query 111366 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCG 111424
|||||||| |||| | || ||||| ||||| | | |||||||| | ||||| | ||
Sbjct 1206884 AGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAAGCTTCT 1206825
Query 111425 GCGGC----TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGC 111480
| | | |||||| | ||| || ||| || || ||||| ||| || ||
Sbjct 1206824 GAGCCTTTATGGTACGACGGC-----CCTTTCCAGCCTTTTCATACTTCTCGTAAAGAGC 1206770
Query 111481 TTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAG 111539
||||| || || || |||| | || || || || || || || || | ||| |
Sbjct 1206769 CTCAAATTCATCTCCGTAAACGTCAGCAAGGCCAGG-GCATTCGTTGGGGCACATAAGTG 1206711
Query 111540 ACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG--ATGA 111597
||| | | || | | | || ||||||||||| || || |||||||| |||| ||||
Sbjct 1206710 TCCAATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGA 1206651
Query 111598 AAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTC 111657
|| ||||| | ||| |||||| | || || || || | || | || ||
Sbjct 1206650 AA--AGATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTC 1206593
Query 111658 CATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACG------ 111711
| | ||| | ||||| ||||| || |||| || | | || ||||
Sbjct 1206592 GAACACATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACC---AGGACGCTTGTT 1206536
Query 111712 CCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACC 111771
|||| |||| | || || || || ||| ||| | || || | ||| |||| ||| ||
Sbjct 1206535 CCCACCTTGGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCC 1206476
Query 111772 ATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTG 111831
|| || || || || || ||| || | | || | | | ||| |
Sbjct 1206475 ATTCGAGGTTCCGTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACT 1206416
Query 111832 CATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGAT 111891
| |||||| || || || |||| ||||| |||| || | | ||||| | || ||
Sbjct 1206415 GAGCCCAATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAAT 1206356
Query 111892 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGG 111951
||| | || || || ||||| || | |||||||| | |||||| || ||||
Sbjct 1206355 ACCCTCAATAGAATCGTCCTTCATGTTTACGAGGAAGCACGAGCTCATCTGAGGCTTTGG 1206296
Query 111952 TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGT 112010
|| || |||||| | | ||| || | ||||| |||| || | | |||||| ||
Sbjct 1206295 AGTTCCTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAA-GTATTTGTTGGACATAAGGT 1206237
Query 112011 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGA 112070
||| ||||| | ||| ||||| || || || || || || | ||| |||||||
Sbjct 1206236 TGTAAGTCTCTACGACTTTGGGTATGTCATCGCCATGAATACCAATGGAGACGCGCATGA 1206177
Query 112071 ACATGTACTGTGGG 112084
||| | ||| |||
Sbjct 1206176 TCATATGCTGAGGG 1206163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031874393600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |