Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1 215 6e-51
>seq1
Length=2987201
Score = 215 bits (238), Expect = 6e-51
Identities = 1146/1806 (63%), Gaps = 51/1806 (3%)
Strand=Plus/Plus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280
||| ||| | ||| |||||||||| |||| ||||||||||| || ||||| ||
Sbjct 1206163 CCCTCAGCATATGATCATGCGCGTCTCCATTGGTATTCATGGCGATGACATACCCAAAGT 1206222
Query 104281 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 104339
| | ||||| ||| || |||||| | | || |||| ||||| | || ||| | |
Sbjct 1206223 CGTAGAGACTTACAACCTTATGTCCAACAAATAC-TTCACCCACGCCTCGCCCACCTTGT 1206281
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
|||||| || || |||| || || ||| | |||||||| | || ||||| |
Sbjct 1206282 ACAATGCAGGAACTCCAAAGCCTCAGATGAGCTCGTGCTTCCTCGTAAACATGAAGGACG 1206341
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
| || || | ||||| || | ||||| | | || |||| ||||| |||| || |
Sbjct 1206342 ATTCTATTGAGGGTATTTACGATACTCTGAAGAGCTGCGCGCTCATCTCGAAGTCTGCCG 1206401
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519
| || |||||| | | ||| | | | || | | || ||| || || |
Sbjct 1206402 GTGGGATTGGGCTCAGTGTGCATAACATCCGCGCTACTGGCTCATATATAGCTGGTACGA 1206461
Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579
| || || |||| ||| |||| ||| | || || | ||| ||| || || || |
Sbjct 1206462 ACGGAACCTCGAATGGGATTCTTCCCATGTTGCGTGTGTACAACAACACTGCTCGTTACG 1206521
Query 104580 TAAATCAAGCTGGG------CGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633
| | |||| |||| |||| || | | || |||| || ||||| ||||
Sbjct 1206522 TCGACCAAGGTGGGAACAAGCGTCCT---GGTGCCTTTGCCATCTACCTCGAGCCGTGGC 1206578
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693
| | ||| | | || || | || |||| || || || | || ||| ||
Sbjct 1206579 ATGACGATGTGTTCGACTTTATCGACCTGCGCAAAAATCACGGCAAGGAAGAGATTCGCG 1206638
Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753
|||||||| ||| || || |||||||| ||||| ||||||||| | || | | |
Sbjct 1206639 CACGCGATCTTTTCATGGCCCTTTGGATTCCCGATCTGTTCATGAAGCGCGTCAAAGCGG 1206698
Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812
|| ||||| | || | || || || || || ||||| || | || | ||
Sbjct 1206699 ATGCTGATTGGACACTTATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACGTTTACGGA 1206757
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872
|| || ||||| || |||||| ||||| || |||| | || | || ||
Sbjct 1206758 GATGAATTTGAGGCTCTTTACGAGAAGTATGAA----AAGG-CTGGAAAGGGCCGTCGTA 1206812
Query 104873 CCA-----GCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926
||| ||| | || | | ||| | |||||||| || |||| |||||||||||||
Sbjct 1206813 CCATAAAGGCT-CAGAAGCTTTGGTACGCTATTCTTGAGGCTCAGACCGAGACTGGTAAC 1206871
Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986
|| | |||||| ||||| || || |||| ||||| || || |||||| | ||
Sbjct 1206872 CCCTTCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAATCTTGGAACC 1206931
Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046
|||||||| |||||| | ||| ||||| | || | | || | || ||||| |||
Sbjct 1206932 ATCAAGAGCTCCAATTTGTGTTGCGAAATTGTTGAGTATTCATCCCCTGAGGAGACTGCT 1206991
Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCC--CAAGTATGTGGATCCAG--AGACAAAG-A 105101
||||| ||||| || || | || ||||| | ||| | ||| ||| || |
Sbjct 1206992 GTGTGCAACCTTGCCTCTGTAGCCCTCCCTGCTTTTATTAAAACGCAGGAAGATGGAGTA 1207051
Query 105102 CA-TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160
|| ||||| | | | || ||| ||| || | || ||| | ||||
Sbjct 1207052 CAGTTTGACTTCAAGAGTCTTCACAGCGTTGTCAAGGTGATTACTCGGAACTTGAACAAC 1207111
Query 105161 GTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACAC 105217
| || || | ||| | |||||| ||| ||| |||||| ||||| ||| | ||
Sbjct 1207112 ATCATCGACAAAAACTATTACCCAGTTCCTGAG---GCTCGTCTGTCTAACATGCGTCAT 1207168
Query 105218 CGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGT-CGCCACGC 105276
|| || |||| || ||||| || ||||| || |||| ||| ||| | | |||| |
Sbjct 1207169 CGCCCCATTGCCCTGGGTGTCCAAGGTCTTGCTGATGCCTTC-TTCATGCTGCGCCTTCC 1207227
Query 105277 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336
|| || || || || |||||||| |||| | | || |||||||| || || ||||
Sbjct 1207228 TTTCGACTCTGAAGAGGCGAAGGAGCTCAACGTCCAGATCTTTGAGACTATCTACCACGG 1207287
Query 105337 CGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 105396
||| | |||||| |||||||| || || ||||| ||||| | | |||||
Sbjct 1207288 AGCTGTGGAGGCGTCGATTGAGTTGGCTCAGCGCGACGGTCCTTATGAGTCTTACGAGGG 1207347
Query 105397 TTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCA---AGC 105452
||| || || |||||| | |||| | ||| |||||| | | | ||| |||
Sbjct 1207348 CAGTCCTGCCTC-CAAGGGTGAGCTTTCCTACGATTTGTGGGGTGTTAATCCCACCGAGC 1207406
Query 105453 TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGG--AGAAGGGTCTTCGTAACAG 105510
|| | || ||||| |||| |||| || ||| | || | || ||||||||
Sbjct 1207407 TT---TGGGATTGGGATACTCTGAAGG--CGGATCTGGCTAAGTACGGGCTTCGTAATTC 1207461
Query 105511 TCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 105570
||| | | ||||| ||||| || || || ||| | || || ||||| | ||||||||
Sbjct 1207462 GCTCTTAGTTGCTCCGATGCCTACCGCGTCGACCTCTCAGATTTTGGGCTACAATGAATG 1207521
Query 105571 CTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGAT 105630
||| || || ||||| | || |||| | | | ||||| |||||||| |||
Sbjct 1207522 CTTCGAGCCATACACCTCAAATTTCTACTCGCGCCGTGTTCTCGCCGGAGAGTTCCAGAT 1207581
Query 105631 TGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAA 105690
|||||| ||||| || | ||||| || || || || ||| | | || |||||
Sbjct 1207582 TGTCAATCCTTATCTCTTGAAGGACCTTGTCGAAATGGGCCTTTGGAACGACGACATGAA 1207641
Query 105691 GGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAAT 105750
| | | | || | || || || ||| | | ||| ||||| |||| |
Sbjct 1207642 GAACCGTCTCGTTGCCTCTGGGGGCTCGATTAAGGACATTCCCTCGATTCCTGATGACCT 1207701
Query 105751 TAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGC 105810
|| | | ||| ||||||||||| |||| |||| | || || ||||||||
Sbjct 1207702 CAAAGACCTCTACAAGACAGTTTGGGAGATCAGTCAAAAGGTGATTATCGATATGGCCGC 1207761
Query 105811 AGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAAC 105870
| | || | ||||| || |||||||| ||| |||| ||| ||| || || ||
Sbjct 1207762 TGGCAGAGGACCTTTCATCGACCAAAGTCAGAGTCTGAACATCTATATGCAATCCCCCAC 1207821
Query 105871 GATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGAT 105930
||| |||||| | ||||||| | ||| | ||| || || ||||| || || ||
Sbjct 1207822 AATGGGCAAGCTTACGAGTATGCACTTCTACGGCTGGTCTAAAGGGCTCAAGACCGGTAT 1207881
Query 105931 GTATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGAACCAGAATG 105990
||| || || || || | || || || ||||| |||| | |||| | ||| |
Sbjct 1207882 GTACTATCTGCGCACTCAAGCCGCTTCGGCACCGATTCAATTCACTGTTGACCAAGAGTC 1207941
Query 105991 TGTGGC 105996
| ||||
Sbjct 1207942 TCTGGC 1207947
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260683347840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |