Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1 215 6e-51 >seq1 Length=2987201 Score = 215 bits (238), Expect = 6e-51 Identities = 1146/1806 (63%), Gaps = 51/1806 (3%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| | ||| |||||||||| |||| ||||||||||| || ||||| || Sbjct 1206163 CCCTCAGCATATGATCATGCGCGTCTCCATTGGTATTCATGGCGATGACATACCCAAAGT 1206222 Query 104281 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | | ||||| ||| || |||||| | | || |||| ||||| | || ||| | | Sbjct 1206223 CGTAGAGACTTACAACCTTATGTCCAACAAATAC-TTCACCCACGCCTCGCCCACCTTGT 1206281 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||||| || || |||| || || ||| | |||||||| | || ||||| | Sbjct 1206282 ACAATGCAGGAACTCCAAAGCCTCAGATGAGCTCGTGCTTCCTCGTAAACATGAAGGACG 1206341 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 | || || | ||||| || | ||||| | | || |||| ||||| |||| || | Sbjct 1206342 ATTCTATTGAGGGTATTTACGATACTCTGAAGAGCTGCGCGCTCATCTCGAAGTCTGCCG 1206401 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | || |||||| | | ||| | | | || | | || ||| || || | Sbjct 1206402 GTGGGATTGGGCTCAGTGTGCATAACATCCGCGCTACTGGCTCATATATAGCTGGTACGA 1206461 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | || || |||| ||| |||| ||| | || || | ||| ||| || || || | Sbjct 1206462 ACGGAACCTCGAATGGGATTCTTCCCATGTTGCGTGTGTACAACAACACTGCTCGTTACG 1206521 Query 104580 TAAATCAAGCTGGG------CGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 | | |||| |||| |||| || | | || |||| || ||||| |||| Sbjct 1206522 TCGACCAAGGTGGGAACAAGCGTCCT---GGTGCCTTTGCCATCTACCTCGAGCCGTGGC 1206578 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 | | ||| | | || || | || |||| || || || | || ||| || Sbjct 1206579 ATGACGATGTGTTCGACTTTATCGACCTGCGCAAAAATCACGGCAAGGAAGAGATTCGCG 1206638 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 |||||||| ||| || || |||||||| ||||| ||||||||| | || | | | Sbjct 1206639 CACGCGATCTTTTCATGGCCCTTTGGATTCCCGATCTGTTCATGAAGCGCGTCAAAGCGG 1206698 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 || ||||| | || | || || || || || ||||| || | || | || Sbjct 1206699 ATGCTGATTGGACACTTATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACGTTTACGGA 1206757 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872 || || ||||| || |||||| ||||| || |||| | || | || || Sbjct 1206758 GATGAATTTGAGGCTCTTTACGAGAAGTATGAA----AAGG-CTGGAAAGGGCCGTCGTA 1206812 Query 104873 CCA-----GCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926 ||| ||| | || | | ||| | |||||||| || |||| ||||||||||||| Sbjct 1206813 CCATAAAGGCT-CAGAAGCTTTGGTACGCTATTCTTGAGGCTCAGACCGAGACTGGTAAC 1206871 Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986 || | |||||| ||||| || || |||| ||||| || || |||||| | || Sbjct 1206872 CCCTTCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAATCTTGGAACC 1206931 Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046 |||||||| |||||| | ||| ||||| | || | | || | || ||||| ||| Sbjct 1206932 ATCAAGAGCTCCAATTTGTGTTGCGAAATTGTTGAGTATTCATCCCCTGAGGAGACTGCT 1206991 Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCC--CAAGTATGTGGATCCAG--AGACAAAG-A 105101 ||||| ||||| || || | || ||||| | ||| | ||| ||| || | Sbjct 1206992 GTGTGCAACCTTGCCTCTGTAGCCCTCCCTGCTTTTATTAAAACGCAGGAAGATGGAGTA 1207051 Query 105102 CA-TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160 || ||||| | | | || ||| ||| || | || ||| | |||| Sbjct 1207052 CAGTTTGACTTCAAGAGTCTTCACAGCGTTGTCAAGGTGATTACTCGGAACTTGAACAAC 1207111 Query 105161 GTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACAC 105217 | || || | ||| | |||||| ||| ||| |||||| ||||| ||| | || Sbjct 1207112 ATCATCGACAAAAACTATTACCCAGTTCCTGAG---GCTCGTCTGTCTAACATGCGTCAT 1207168 Query 105218 CGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGT-CGCCACGC 105276 || || |||| || ||||| || ||||| || |||| ||| ||| | | |||| | Sbjct 1207169 CGCCCCATTGCCCTGGGTGTCCAAGGTCTTGCTGATGCCTTC-TTCATGCTGCGCCTTCC 1207227 Query 105277 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336 || || || || || |||||||| |||| | | || |||||||| || || |||| Sbjct 1207228 TTTCGACTCTGAAGAGGCGAAGGAGCTCAACGTCCAGATCTTTGAGACTATCTACCACGG 1207287 Query 105337 CGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 105396 ||| | |||||| |||||||| || || ||||| ||||| | | ||||| Sbjct 1207288 AGCTGTGGAGGCGTCGATTGAGTTGGCTCAGCGCGACGGTCCTTATGAGTCTTACGAGGG 1207347 Query 105397 TTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCA---AGC 105452 ||| || || |||||| | |||| | ||| |||||| | | | ||| ||| Sbjct 1207348 CAGTCCTGCCTC-CAAGGGTGAGCTTTCCTACGATTTGTGGGGTGTTAATCCCACCGAGC 1207406 Query 105453 TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGG--AGAAGGGTCTTCGTAACAG 105510 || | || ||||| |||| |||| || ||| | || | || |||||||| Sbjct 1207407 TT---TGGGATTGGGATACTCTGAAGG--CGGATCTGGCTAAGTACGGGCTTCGTAATTC 1207461 Query 105511 TCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 105570 ||| | | ||||| ||||| || || || ||| | || || ||||| | |||||||| Sbjct 1207462 GCTCTTAGTTGCTCCGATGCCTACCGCGTCGACCTCTCAGATTTTGGGCTACAATGAATG 1207521 Query 105571 CTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGAT 105630 ||| || || ||||| | || |||| | | | ||||| |||||||| ||| Sbjct 1207522 CTTCGAGCCATACACCTCAAATTTCTACTCGCGCCGTGTTCTCGCCGGAGAGTTCCAGAT 1207581 Query 105631 TGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAA 105690 |||||| ||||| || | ||||| || || || || ||| | | || ||||| Sbjct 1207582 TGTCAATCCTTATCTCTTGAAGGACCTTGTCGAAATGGGCCTTTGGAACGACGACATGAA 1207641 Query 105691 GGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAAT 105750 | | | | || | || || || ||| | | ||| ||||| |||| | Sbjct 1207642 GAACCGTCTCGTTGCCTCTGGGGGCTCGATTAAGGACATTCCCTCGATTCCTGATGACCT 1207701 Query 105751 TAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGC 105810 || | | ||| ||||||||||| |||| |||| | || || |||||||| Sbjct 1207702 CAAAGACCTCTACAAGACAGTTTGGGAGATCAGTCAAAAGGTGATTATCGATATGGCCGC 1207761 Query 105811 AGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAAC 105870 | | || | ||||| || |||||||| ||| |||| ||| ||| || || || Sbjct 1207762 TGGCAGAGGACCTTTCATCGACCAAAGTCAGAGTCTGAACATCTATATGCAATCCCCCAC 1207821 Query 105871 GATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGAT 105930 ||| |||||| | ||||||| | ||| | ||| || || ||||| || || || Sbjct 1207822 AATGGGCAAGCTTACGAGTATGCACTTCTACGGCTGGTCTAAAGGGCTCAAGACCGGTAT 1207881 Query 105931 GTATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGAACCAGAATG 105990 ||| || || || || | || || || ||||| |||| | |||| | ||| | Sbjct 1207882 GTACTATCTGCGCACTCAAGCCGCTTCGGCACCGATTCAATTCACTGTTGACCAAGAGTC 1207941 Query 105991 TGTGGC 105996 | |||| Sbjct 1207942 TCTGGC 1207947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260683347840