Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq3 266 1e-65
seq2 104 7e-17
seq1 89.7 2e-12
>seq3
Length=2072284
Score = 266 bits (294), Expect = 1e-65
Identities = 941/1460 (64%), Gaps = 19/1460 (1%)
Strand=Plus/Plus
Query 349198 CGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCG 349257
|||| | || || || || || ||||| || |||||||| || | ||||||||
Sbjct 232297 CGCTGTTGGTATTGACTTGGGAACTACATACTCTTGTGTAGCCCACTTTTCTAATGATCG 232356
Query 349258 TGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTAC 349317
||| || || || || || || ||||||||| |||| || || || | |||||| || ||
Sbjct 232357 TGTCGAGATTATCGCTAACGACCAAGGTAACCGAACCACTCCTTCGTTCGTTGCCTTCAC 232416
Query 349318 CGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAA 349377
||| | |||||| | |||||||| | || || || || ||||| || || | ||
Sbjct 232417 CGATAGCGAGCGTCTCATTGGTGACGCCGCCAAGAACCAGGCTGCCATGAACCCTCATAA 232476
Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATC 349437
|| || |||||||| ||||| || || || | | | |||| || ||
Sbjct 232477 CACCGTCTTTGATGCCAAGCGTCTCATCGGCCGCAAACTCAATGACCCCGAGACTCAGAA 232536
Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497
|| | || || || ||||| | |||||| || || | || || | ||||
Sbjct 232537 CGACATCAAGCACTTCCCTTTCAAGGTTGTTGACAAGAACA---ACAAGCCTGCTGTTGA 232593
Query 349498 GGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCC--GAAGAAATTTCATCAATGGT 349554
||| || | || ||||| || || |||| || | || || ||||| || |||||
Sbjct 232594 GGTCGAGTTCAAGGGTGAGACCAAGG---TTTTCACTCCTGAGGAGATTTCTTCCATGGT 232650
Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614
| | |||| |||||||| | |||||| | || | |||| || || | || ||
Sbjct 232651 TCTTCTTAAGATGAAGGAGACTGCTGAGGGCTACCTCGGTGGAAAGGTTGACCAGGCCGT 232710
Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674
|| ||||| || ||||| || || || | |||||| || || || || || || |
Sbjct 232711 CATCACTGTCCCTGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGACGCCGGAAC 232770
Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734
|||||| || | || || || | || || || || |||||||| || || ||||||||
Sbjct 232771 CATTGCTGGTCTCAACGTCCTTCGTATTATCAACGAGCCCACTGCGGCTGCCATTGCATA 232830
Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794
|| ||||| || | | | || | ||| | || || || || || ||||||||
Sbjct 232831 CGGCCTTGACAAGAAGGGCTCTGGTGAGCATAATGTCCTCATCTTCGACTTGGGTGGTGG 232890
Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854
||| || ||||| || | | | |||| || || || || || || || | || ||
Sbjct 232891 TACCTTCGATGTCTCTTTGTTGAGCATTGACGATGGTATCTTCGAGGTCAAGTCCACCGC 232950
Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914
|||||| || || | ||||| || ||||| || || ||||| || || || | |
Sbjct 232951 TGGTGACACTCACTTGGGTGGTGAGGATTTCGACAACCGTCTGGTCAACCACTTCGCCCA 233010
Query 349915 AGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCC 349973
|| || ||||| |||| || | || ||| | || | | || | || || |
Sbjct 233011 GGAGTTCAAGCG-CAAGTACAAGAAGGACATTACTGGCAACCAGCGTGCCCTCCGCCGTC 233069
Query 349974 TAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTG 350033
| |||||||| || || ||||| ||||| || | || || ||||||| || ||||||
Sbjct 233070 TGAGAACTGCATGCGAGCGTGCCAAGCGCGCCCTCTCCTCCTCTACCCAGACTCCTATTG 233129
Query 350034 AAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTG 350093
| || || ||| | ||| || | || |||| | ||||| || |||||||| || |
Sbjct 233130 AGATCGACTCTTTGTATGAGGGTATTGACTTCTACACTTCTATCACTCGTGCTCGATTCG 233189
Query 350094 AAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAG 350153
| || | || |||||||| | | || || |||||| || || || | || |
Sbjct 233190 AGGAGATGTGCCAAGATCTTTTCCGCTCTACCATCTCTCCTGTCGAGAAGGTCCTCAAGG 233249
Query 350154 ATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTA 350213
|||| || | ||| | | || | || | || | ||||||||||| || ||||
Sbjct 233250 ATGCCAAGGTTGGCAAGTCTGACGTTCACGAGATTGTGCTTGTTGGTGGTTCCACTCGTA 233309
Query 350214 TTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTA--GATC 350271
| || || |||| || | | ||| || || |||||| || | || | | ||
Sbjct 233310 TCCCCAAGATTCAGAAGCTCGTTAGTGATTTCTTCTCTGGCAAGGAGC--TCAACCGCTC 233367
Query 350272 AATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGG 350331
|| || || ||||| || ||||| || ||||||||||||||||| | || | | ||
Sbjct 233368 TATCAACCCTGATGAGGCCGTTGCCTACGGTGCTGCTGTTCAGGCTGCCATCCTTACCGG 233427
Query 350332 AAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGG 350391
| | | ||| || | | | || || | || || ||||| |||| | ||||| ||
Sbjct 233428 CGACACGTCTTCCAAGACTCAGGACCTGCTTCTTCTTGATGTTGCTCCTTTGTCGCTCGG 233487
Query 350392 ATTAGAAACTTCTGGTG--AAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCT 350449
| || || |||| | ||| | || ||||| || | || || || | ||
Sbjct 233488 TATTGAGACCGCTGGCGGTCAGT--TCACCAAGCTTATCCCGCGTAACAGCACCATCCCG 233545
Query 350450 ACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAA 350509
|| || ||||| | | || || || || ||||| ||||| | || || ||
Sbjct 233546 ACCAAGAAGTCTGAGATCTTCTCCACTGCCGCTGATAACCAGCCCGGTGTGTTGATCCAG 233605
Query 350510 GTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTA 350569
|| ||||| ||||| ||| | | ||| || || || | || || | || ||
Sbjct 233606 GTCTTTGAGGGTGAGCGTCCACTGACTCGTGACAACAACATTCTCGGCAAGTTCGAGCTC 233665
Query 350570 AGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGAT 350629
|| | || || || || | || |||||||| || ||| |||||||| |||||
Sbjct 233666 AGCGGTATCCCTCCTGCCCCCCGTGGTACCCCTCAGATCGAGGTCACTTTCGATGTTGAT 233725
Query 350630 TCAAATGGTATTTTAAATGT 350649
| |||||||| || || ||
Sbjct 233726 GCTAATGGTATCTTGAACGT 233745
Score = 194 bits (214), Expect = 5e-44
Identities = 739/1133 (65%), Gaps = 39/1133 (3%)
Strand=Plus/Plus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
||||| || |||||||| |||||||| || || || ||||| | | || | |
Sbjct 1756128 GCTATCGGTATCGATTTGGGTACTACGTACTCATGCGTTGCCACCTACGAGAACGCT--- 1756184
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| || || || || ||||| || |||||| | || || || | |||||| || ||
Sbjct 1756185 GTTGAGATCATCGCCAATGAGCAGGGTAACCGTGTCACCCCGTCTTTCGTTGCCTTCACT 1756244
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCT-AATCCAAAAAA 349377
|| | |||||| | || |||||| |||| || || || ||||| ||| || || | |||
Sbjct 1756245 GATAAGGAGCGTCTAATCGGTGATGCTGCCAAGAACCAGGCTGC-GCTCAACCCGAGAAA 1756303
Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATC 349437
|| ||||| ||||||||||| ||||||||| | |||| ||| | || ||
Sbjct 1756304 CACTGTTTTCGATGCTAAGCGTCTTATTGGTCGTCGTTTCGATGAGACTACTGTCCAGAG 1756363
Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497
||| | || | || || | || || | | |||| || ||| | |||||
Sbjct 1756364 CGATATCAAGAGCTGGCCCTTCAAGGTCATTGACAGAAACGG---CAACCCATTCATTGA 1756420
Query 349498 GGTTGAATATAAAGGTG-AACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556
|||||| || || | ||| || || || | || | || ||||| | ||||||
Sbjct 1756421 GGTTGAGTACCTTGGAGAAACTAAGAC-TTTCTCTCCTCAGGAGATTTCTGCCATGGTTC 1756479
Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616
| || || |||||||| || || || || | | | | | || | || ||
Sbjct 1756480 TTGTCAAGATGAAGGAGATCGCCGAGGCCAAGCTTGCCCAGAAGGTTGACAAGGCCGTCG 1756539
Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676
| ||||| || ||||| || || || | || ||| || || || ||||||||| ||
Sbjct 1756540 TCACTGTTCCTGCCTACTTCAACGACTCTCAACGTCAGGCCACCAAGGATGCTGGCTCCA 1756599
Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736
|||| || | ||||| || | || || || || || || ||||| || |||||||| |
Sbjct 1756600 TTGCTGGCCTCAATGTCCTTCGTATTATCAACGAGCCTACCGCTGCTGCTATTGCATACG 1756659
Query 349737 GGCTTGATAAAATGAGT--GACCAAGaa--aaaaaTA--TTCTTATTTTTGATTTAGGTG 349790
| |||| | || || |||| || | | || || | |||||||| ||||| || |
Sbjct 1756660 GTCTTGGT--GCTG-GTAAGACCGAGGAGGAGAAGTACGTCCTTATTTTCGATTTGGGCG 1756716
Query 349791 GTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAA 349850
|||||||||| ||||| || | || | | | | || | || | ||||| ||||
Sbjct 1756717 GTGGTACTTTCGATGTTTCCTTGCTTTCTATCCAGGGTGGTGTCTTCAATGTTAAGGCAA 1756776
Query 349851 CTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA---TAATCGTCTCGTTTCGCATT 349907
|||| |||||||| || | ||||| | ||||| || || | ||||||| || |
Sbjct 1756777 CTGCCGGTGATACTCACTTGGGTGGCCAGGATTTCGACACCAACCTTCTCGTT---CACT 1756833
Query 349908 TTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGC 349967
| | ||||| ||| | || | || || | || || || | || | |
Sbjct 1756834 TCCAGGAGGAATTCAAGAAGAAGACTGGCGTCGACATCAGCAATGATGCTCGTGCTCTCC 1756893
Query 349968 GTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCT 350027
|||| || | ||||| || || ||||| |||||| | | || ||| | |||| ||
Sbjct 1756894 GTCGTCTGCGCACTGCCTGCGAGCGTGCCAAGCGTACTCTCTCTTCTGCATCCCAGACTA 1756953
Query 350028 CTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTC-TTTTCATCTATTACACGTGCT 350086
| |||| | ||||| |||||| | || | || ||| ||| | | || || |||
Sbjct 1756954 CCGTTGAGGTCGATTCCCTTGCTCAGGGTGAGGACTTCAACGTCAAC-CTGACCCGAGCT 1757012
Query 350087 CGGTTTGAAG-AATTATGTATGGATCTTTT-TAGAGCAACAATGGATCCTGTGGAAAAAG 350144
|| || || | ||| | | ||||| ||| | || || || ||||| || || |
Sbjct 1757013 CGATTCGAGGCTCTTAACGA-CAAGCTTTTCAAGAAC-ACTATCGACCCTGTCGAGAAGG 1757070
Query 350145 TATTAAAAGATGCAAAAATGTCCAAAAATC--AGATTGATGAAGTAGTTTTAGTTGGTGG 350202
|| | || ||||| ||| | || || || ||||||| || || | ||||||||
Sbjct 1757071 TACTCAAGGATGC--CGGTGTTGAGAAGTCAAAGGTTGATGAGGTCGTCCTTGTTGGTGG 1757128
Query 350203 TTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACC 350262
|| || ||||| || || ||||| | | || || || || || ||| ||||| |
Sbjct 1757129 CTCCACTCGTATCCCCAAGGTTCAGCGCCTCCTCTCAGACTTCTTCGGCGGC-AAGAAGC 1757187
Query 350263 TTCTAGATCA--ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCA 350313
|| ||| | || ||||| ||||| |||||||| | ||||||||||||||
Sbjct 1757188 -TCGAGAAGAGCATCAATCCCGATGAGGCTGTTGCTCACGGTGCTGCTGTTCA 1757239
Score = 116 bits (128), Expect = 1e-20
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570
|| ||||| | | |||||| | ||| ||||| ||||| ||||| || || || || ||
Sbjct 540874 CCGCCACGGAGACGTAGAACCAAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAA 540815
Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630
| || || ||||| ||||| || || ||||||||||| ||||| || || ||||| |||
Sbjct 540814 AGAGTACGACCATCGTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGGA 540755
Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690
|||||||| || || || ||| || ||| ||||| | || | || |||
Sbjct 540754 ATTCCTTCCTTGTCAGAGATCTTACTCTTGACAGCCTCAATGGTGTCGCTAGACTCTACT 540695
Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || |||| ||||| || |||| || || | |||||||||||
Sbjct 540694 TCTAGCGTAATGGTCTTGCCCGTTAACGTCTTGATGAAAATCTGCAT 540648
>seq2
Length=2890200
Score = 104 bits (114), Expect = 7e-17
Identities = 163/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||||||||| | | || || | |||||||||||||| || ||||| || || || ||
Sbjct 724322 ACCACCACGGAGACGGAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGA 724381
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
| || || ||||| ||||| || || || || ||||| ||||| ||||| ||||| ||
Sbjct 724382 AAGGGTGCGGCCATCATCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGG 724441
Query 140630 AATTCCTTCTTTATC-CTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTTCA 140687
|| || || ||||| |||| | | ||| || ||| || || | ||| | ||
Sbjct 724442 GATGCCCTCCTTATCGCTGA--TCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCC 724499
Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || |||| ||||| || || || ||||| | || ||||||||
Sbjct 724500 ACCTCGAGGGTAATAGTCTTACCCGTCAGGGTTTTAATGAAGATCTGCAT 724549
>seq1
Length=2987201
Score = 89.7 bits (98), Expect = 2e-12
Identities = 100/132 (76%), Gaps = 4/132 (3%)
Strand=Plus/Minus
Query 377451 TTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAA 377510
||||| ||| || || ||| | || || || ||| || | || |||||| | |||||
Sbjct 667124 TTCAA-GCGAGGTACTCCAAGGGTTACGTT---TTTTGAGGAGACTCCAGCATAATGGAA 667069
Query 377511 AGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAAC 377570
||||| ||||| | ||||||| |||||||||||| || || || ||||| || || ||
Sbjct 667068 CGTATTGAGAGTCATCTGAGTAGCGGGCTCACCAATAGATTGAGCGGCAATGACTCCGAC 667009
Query 377571 CATTTCTCCAGG 377582
|||||| |||||
Sbjct 667008 CATTTCACCAGG 666997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515254089372848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |