Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq3 266 1e-65 seq2 104 7e-17 seq1 89.7 2e-12 >seq3 Length=2072284 Score = 266 bits (294), Expect = 1e-65 Identities = 941/1460 (64%), Gaps = 19/1460 (1%) Strand=Plus/Plus Query 349198 CGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCG 349257 |||| | || || || || || ||||| || |||||||| || | |||||||| Sbjct 232297 CGCTGTTGGTATTGACTTGGGAACTACATACTCTTGTGTAGCCCACTTTTCTAATGATCG 232356 Query 349258 TGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTAC 349317 ||| || || || || || || ||||||||| |||| || || || | |||||| || || Sbjct 232357 TGTCGAGATTATCGCTAACGACCAAGGTAACCGAACCACTCCTTCGTTCGTTGCCTTCAC 232416 Query 349318 CGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAA 349377 ||| | |||||| | |||||||| | || || || || ||||| || || | || Sbjct 232417 CGATAGCGAGCGTCTCATTGGTGACGCCGCCAAGAACCAGGCTGCCATGAACCCTCATAA 232476 Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATC 349437 || || |||||||| ||||| || || || | | | |||| || || Sbjct 232477 CACCGTCTTTGATGCCAAGCGTCTCATCGGCCGCAAACTCAATGACCCCGAGACTCAGAA 232536 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 || | || || || ||||| | |||||| || || | || || | |||| Sbjct 232537 CGACATCAAGCACTTCCCTTTCAAGGTTGTTGACAAGAACA---ACAAGCCTGCTGTTGA 232593 Query 349498 GGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCC--GAAGAAATTTCATCAATGGT 349554 ||| || | || ||||| || || |||| || | || || ||||| || ||||| Sbjct 232594 GGTCGAGTTCAAGGGTGAGACCAAGG---TTTTCACTCCTGAGGAGATTTCTTCCATGGT 232650 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | | |||| |||||||| | |||||| | || | |||| || || | || || Sbjct 232651 TCTTCTTAAGATGAAGGAGACTGCTGAGGGCTACCTCGGTGGAAAGGTTGACCAGGCCGT 232710 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || ||||| || ||||| || || || | |||||| || || || || || || | Sbjct 232711 CATCACTGTCCCTGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGACGCCGGAAC 232770 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 |||||| || | || || || | || || || || |||||||| || || |||||||| Sbjct 232771 CATTGCTGGTCTCAACGTCCTTCGTATTATCAACGAGCCCACTGCGGCTGCCATTGCATA 232830 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || ||||| || | | | || | ||| | || || || || || |||||||| Sbjct 232831 CGGCCTTGACAAGAAGGGCTCTGGTGAGCATAATGTCCTCATCTTCGACTTGGGTGGTGG 232890 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 ||| || ||||| || | | | |||| || || || || || || || | || || Sbjct 232891 TACCTTCGATGTCTCTTTGTTGAGCATTGACGATGGTATCTTCGAGGTCAAGTCCACCGC 232950 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 |||||| || || | ||||| || ||||| || || ||||| || || || | | Sbjct 232951 TGGTGACACTCACTTGGGTGGTGAGGATTTCGACAACCGTCTGGTCAACCACTTCGCCCA 233010 Query 349915 AGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCC 349973 || || ||||| |||| || | || ||| | || | | || | || || | Sbjct 233011 GGAGTTCAAGCG-CAAGTACAAGAAGGACATTACTGGCAACCAGCGTGCCCTCCGCCGTC 233069 Query 349974 TAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTG 350033 | |||||||| || || ||||| ||||| || | || || ||||||| || |||||| Sbjct 233070 TGAGAACTGCATGCGAGCGTGCCAAGCGCGCCCTCTCCTCCTCTACCCAGACTCCTATTG 233129 Query 350034 AAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTG 350093 | || || ||| | ||| || | || |||| | ||||| || |||||||| || | Sbjct 233130 AGATCGACTCTTTGTATGAGGGTATTGACTTCTACACTTCTATCACTCGTGCTCGATTCG 233189 Query 350094 AAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAG 350153 | || | || |||||||| | | || || |||||| || || || | || | Sbjct 233190 AGGAGATGTGCCAAGATCTTTTCCGCTCTACCATCTCTCCTGTCGAGAAGGTCCTCAAGG 233249 Query 350154 ATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTA 350213 |||| || | ||| | | || | || | || | ||||||||||| || |||| Sbjct 233250 ATGCCAAGGTTGGCAAGTCTGACGTTCACGAGATTGTGCTTGTTGGTGGTTCCACTCGTA 233309 Query 350214 TTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTA--GATC 350271 | || || |||| || | | ||| || || |||||| || | || | | || Sbjct 233310 TCCCCAAGATTCAGAAGCTCGTTAGTGATTTCTTCTCTGGCAAGGAGC--TCAACCGCTC 233367 Query 350272 AATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGG 350331 || || || ||||| || ||||| || ||||||||||||||||| | || | | || Sbjct 233368 TATCAACCCTGATGAGGCCGTTGCCTACGGTGCTGCTGTTCAGGCTGCCATCCTTACCGG 233427 Query 350332 AAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGG 350391 | | | ||| || | | | || || | || || ||||| |||| | ||||| || Sbjct 233428 CGACACGTCTTCCAAGACTCAGGACCTGCTTCTTCTTGATGTTGCTCCTTTGTCGCTCGG 233487 Query 350392 ATTAGAAACTTCTGGTG--AAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCT 350449 | || || |||| | ||| | || ||||| || | || || || | || Sbjct 233488 TATTGAGACCGCTGGCGGTCAGT--TCACCAAGCTTATCCCGCGTAACAGCACCATCCCG 233545 Query 350450 ACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAA 350509 || || ||||| | | || || || || ||||| ||||| | || || || Sbjct 233546 ACCAAGAAGTCTGAGATCTTCTCCACTGCCGCTGATAACCAGCCCGGTGTGTTGATCCAG 233605 Query 350510 GTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTA 350569 || ||||| ||||| ||| | | ||| || || || | || || | || || Sbjct 233606 GTCTTTGAGGGTGAGCGTCCACTGACTCGTGACAACAACATTCTCGGCAAGTTCGAGCTC 233665 Query 350570 AGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGAT 350629 || | || || || || | || |||||||| || ||| |||||||| ||||| Sbjct 233666 AGCGGTATCCCTCCTGCCCCCCGTGGTACCCCTCAGATCGAGGTCACTTTCGATGTTGAT 233725 Query 350630 TCAAATGGTATTTTAAATGT 350649 | |||||||| || || || Sbjct 233726 GCTAATGGTATCTTGAACGT 233745 Score = 194 bits (214), Expect = 5e-44 Identities = 739/1133 (65%), Gaps = 39/1133 (3%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| || |||||||| |||||||| || || || ||||| | | || | | Sbjct 1756128 GCTATCGGTATCGATTTGGGTACTACGTACTCATGCGTTGCCACCTACGAGAACGCT--- 1756184 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || || || ||||| || |||||| | || || || | |||||| || || Sbjct 1756185 GTTGAGATCATCGCCAATGAGCAGGGTAACCGTGTCACCCCGTCTTTCGTTGCCTTCACT 1756244 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCT-AATCCAAAAAA 349377 || | |||||| | || |||||| |||| || || || ||||| ||| || || | ||| Sbjct 1756245 GATAAGGAGCGTCTAATCGGTGATGCTGCCAAGAACCAGGCTGC-GCTCAACCCGAGAAA 1756303 Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATC 349437 || ||||| ||||||||||| ||||||||| | |||| ||| | || || Sbjct 1756304 CACTGTTTTCGATGCTAAGCGTCTTATTGGTCGTCGTTTCGATGAGACTACTGTCCAGAG 1756363 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 ||| | || | || || | || || | | |||| || ||| | ||||| Sbjct 1756364 CGATATCAAGAGCTGGCCCTTCAAGGTCATTGACAGAAACGG---CAACCCATTCATTGA 1756420 Query 349498 GGTTGAATATAAAGGTG-AACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556 |||||| || || | ||| || || || | || | || ||||| | |||||| Sbjct 1756421 GGTTGAGTACCTTGGAGAAACTAAGAC-TTTCTCTCCTCAGGAGATTTCTGCCATGGTTC 1756479 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || || |||||||| || || || || | | | | | || | || || Sbjct 1756480 TTGTCAAGATGAAGGAGATCGCCGAGGCCAAGCTTGCCCAGAAGGTTGACAAGGCCGTCG 1756539 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | ||||| || ||||| || || || | || ||| || || || ||||||||| || Sbjct 1756540 TCACTGTTCCTGCCTACTTCAACGACTCTCAACGTCAGGCCACCAAGGATGCTGGCTCCA 1756599 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 |||| || | ||||| || | || || || || || || ||||| || |||||||| | Sbjct 1756600 TTGCTGGCCTCAATGTCCTTCGTATTATCAACGAGCCTACCGCTGCTGCTATTGCATACG 1756659 Query 349737 GGCTTGATAAAATGAGT--GACCAAGaa--aaaaaTA--TTCTTATTTTTGATTTAGGTG 349790 | |||| | || || |||| || | | || || | |||||||| ||||| || | Sbjct 1756660 GTCTTGGT--GCTG-GTAAGACCGAGGAGGAGAAGTACGTCCTTATTTTCGATTTGGGCG 1756716 Query 349791 GTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAA 349850 |||||||||| ||||| || | || | | | | || | || | ||||| |||| Sbjct 1756717 GTGGTACTTTCGATGTTTCCTTGCTTTCTATCCAGGGTGGTGTCTTCAATGTTAAGGCAA 1756776 Query 349851 CTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA---TAATCGTCTCGTTTCGCATT 349907 |||| |||||||| || | ||||| | ||||| || || | ||||||| || | Sbjct 1756777 CTGCCGGTGATACTCACTTGGGTGGCCAGGATTTCGACACCAACCTTCTCGTT---CACT 1756833 Query 349908 TTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGC 349967 | | ||||| ||| | || | || || | || || || | || | | Sbjct 1756834 TCCAGGAGGAATTCAAGAAGAAGACTGGCGTCGACATCAGCAATGATGCTCGTGCTCTCC 1756893 Query 349968 GTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCT 350027 |||| || | ||||| || || ||||| |||||| | | || ||| | |||| || Sbjct 1756894 GTCGTCTGCGCACTGCCTGCGAGCGTGCCAAGCGTACTCTCTCTTCTGCATCCCAGACTA 1756953 Query 350028 CTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTC-TTTTCATCTATTACACGTGCT 350086 | |||| | ||||| |||||| | || | || ||| ||| | | || || ||| Sbjct 1756954 CCGTTGAGGTCGATTCCCTTGCTCAGGGTGAGGACTTCAACGTCAAC-CTGACCCGAGCT 1757012 Query 350087 CGGTTTGAAG-AATTATGTATGGATCTTTT-TAGAGCAACAATGGATCCTGTGGAAAAAG 350144 || || || | ||| | | ||||| ||| | || || || ||||| || || | Sbjct 1757013 CGATTCGAGGCTCTTAACGA-CAAGCTTTTCAAGAAC-ACTATCGACCCTGTCGAGAAGG 1757070 Query 350145 TATTAAAAGATGCAAAAATGTCCAAAAATC--AGATTGATGAAGTAGTTTTAGTTGGTGG 350202 || | || ||||| ||| | || || || ||||||| || || | |||||||| Sbjct 1757071 TACTCAAGGATGC--CGGTGTTGAGAAGTCAAAGGTTGATGAGGTCGTCCTTGTTGGTGG 1757128 Query 350203 TTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACC 350262 || || ||||| || || ||||| | | || || || || || ||| ||||| | Sbjct 1757129 CTCCACTCGTATCCCCAAGGTTCAGCGCCTCCTCTCAGACTTCTTCGGCGGC-AAGAAGC 1757187 Query 350263 TTCTAGATCA--ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCA 350313 || ||| | || ||||| ||||| |||||||| | |||||||||||||| Sbjct 1757188 -TCGAGAAGAGCATCAATCCCGATGAGGCTGTTGCTCACGGTGCTGCTGTTCA 1757239 Score = 116 bits (128), Expect = 1e-20 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 || ||||| | | |||||| | ||| ||||| ||||| ||||| || || || || || Sbjct 540874 CCGCCACGGAGACGTAGAACCAAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAA 540815 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || || ||||| ||||| || || ||||||||||| ||||| || || ||||| ||| Sbjct 540814 AGAGTACGACCATCGTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGGA 540755 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 |||||||| || || || ||| || ||| ||||| | || | || ||| Sbjct 540754 ATTCCTTCCTTGTCAGAGATCTTACTCTTGACAGCCTCAATGGTGTCGCTAGACTCTACT 540695 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || |||| ||||| || |||| || || | ||||||||||| Sbjct 540694 TCTAGCGTAATGGTCTTGCCCGTTAACGTCTTGATGAAAATCTGCAT 540648 >seq2 Length=2890200 Score = 104 bits (114), Expect = 7e-17 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || | |||||||||||||| || ||||| || || || || Sbjct 724322 ACCACCACGGAGACGGAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGA 724381 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || ||||| ||||| || || || || ||||| ||||| ||||| ||||| || Sbjct 724382 AAGGGTGCGGCCATCATCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGG 724441 Query 140630 AATTCCTTCTTTATC-CTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTTCA 140687 || || || ||||| |||| | | ||| || ||| || || | ||| | || Sbjct 724442 GATGCCCTCCTTATCGCTGA--TCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCC 724499 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || |||| ||||| || || || ||||| | || |||||||| Sbjct 724500 ACCTCGAGGGTAATAGTCTTACCCGTCAGGGTTTTAATGAAGATCTGCAT 724549 >seq1 Length=2987201 Score = 89.7 bits (98), Expect = 2e-12 Identities = 100/132 (76%), Gaps = 4/132 (3%) Strand=Plus/Minus Query 377451 TTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAA 377510 ||||| ||| || || ||| | || || || ||| || | || |||||| | ||||| Sbjct 667124 TTCAA-GCGAGGTACTCCAAGGGTTACGTT---TTTTGAGGAGACTCCAGCATAATGGAA 667069 Query 377511 AGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAAC 377570 ||||| ||||| | ||||||| |||||||||||| || || || ||||| || || || Sbjct 667068 CGTATTGAGAGTCATCTGAGTAGCGGGCTCACCAATAGATTGAGCGGCAATGACTCCGAC 667009 Query 377571 CATTTCTCCAGG 377582 |||||| ||||| Sbjct 667008 CATTTCACCAGG 666997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254089372848