Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 253 2e-62
>seq1
Length=2987201
Score = 253 bits (280), Expect = 2e-62
Identities = 1114/1745 (64%), Gaps = 71/1745 (4%)
Strand=Plus/Minus
Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249
|| |||| ||||||||| || |||||||| || || ||| ||||| | ||||||||||
Sbjct 1207896 GTGCGCAGATAGTACATACCGGTCTTGAGCCCTTTAGACCAGCCGTAGAAGTGCATACTC 1207837
Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACT--GGTCGA 78307
| |||||| ||| | ||| | ||| ||||||| || ||| |||| ||||||
Sbjct 1207836 GTAAGCTTGCCCATTGTGGGGGATTGCATATAGATGTTCAG--ACTCTGACTTTGGTCGA 1207779
Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367
|| | | || | | | || ||||| ||||| | | |||||| |||||||| | |
Sbjct 1207778 TGAAAGGTCCTCTGCCAGCGGCCATATCGATAATCACCTTTTGACTGATCTCCCAAACTG 1207719
Query 78368 TCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTAC--------GCTCCC 78419
|| ||| | | | || || || || | || | || | ||| | || |||
Sbjct 1207718 TCTTGTAGAGGTCTTTGAGGTCATCAGGAAT--CGAGGGAATGTCCTTAATCGAGCCCCC 1207661
Query 78420 ACCGGCTCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATC 78479
| ||| || | ||||| || | |||||| | || | ||| ||
Sbjct 1207660 AGAGGCA---ACGAGACGGTTCTTCATGTCGTCGTTCCAAAGGCCCATTTCGACAAGGTC 1207604
Query 78480 CCGGACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGAT 78539
| | || | | || | || |||||| ||||| || |||||| |||||
Sbjct 1207603 CTTCAAGAGATAAGGATTGACAATCTGGAACTCTCCGGCGAGAACACGGCGCGAGTAGAA 1207544
Query 78540 GTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGT 78599
|| | ||||| |||||||| || |||| |||| ||||| | |||||| |||||
Sbjct 1207543 ATTTGAGGTGTATGGCTCGAAGCATTCATTGTAGCCCAAAATCTGAGAGGTCGACGCGGT 1207484
Query 78600 CGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGT--CTTGATCTCGACCTTT 78657
||||| || || || | || ||||| ||||| || | | | | |||| || ||||
Sbjct 1207483 AGGCATCGGAGCAACTAAGAGCGAATTACGAAGCCCGTACTTAGCCAGATC-CG-CCTTC 1207426
Query 78658 AGGCCGTCCCAA----AATTCATTCGCCGCGATC----CCCCACATGTCCGGTTGAAGGA 78709
|| |||||| || | ||| | ||| ||||||| || | ||| |
Sbjct 1207425 AGAGTATCCCAATCCCAAAGC--TCGGTGGGATTAACACCCCACAAATC-GTAGGAAAGC 1207369
Query 78710 T-ACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGT 78768
| ||||| ||| || || |||| | | | ||| |||| || || || || |
Sbjct 1207368 TCACCCTTGGAGGCAGGACTGCCCTCGTAAGACTCATAAGGACCGTCGCGCTGAGCCAAC 1207309
Query 78769 TCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCG 78828
|| ||| | || || ||||||| | || ||| ||||| |||||||||
Sbjct 1207308 TCAATCGACGCCTCCACAGCTCCGTGGTAGATAGTCTCAAAGATCTGGACGTTGAGCTCC 1207249
Query 78829 CGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGG 78888
||||| |||||| | ||||| ||||| | |||| |||| || || || |||
Sbjct 1207248 TTCGCCTCTTCAGAGTCGAAAGGAAGGCGCAGCATGAAGAAGGCATCAGCAAGACCTTGG 1207189
Query 78889 ACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAA 78948
|| || | || || || || || |||||||| | || ||| | ||||||
Sbjct 1207188 ACACCCAGGGCAATGGGGCGATGACGCATGTTAGACAGACGAGCCTCAGGAACTGGGTAA 1207129
Query 78949 AAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTC-GTACAA 79007
|||| ||||||| | ||||| ||| || || | ||| | || | | || |
Sbjct 1207128 TAGTTTTTGTCGATGATGTTGTTCAAGTTCCGAGTAATCACCTT-GACAACGCTGTGAAG 1207070
Query 79008 TTTGGCGAAATCAAAATG------AT-TTCCT-----TTGATGAAAGTCGGTAGGCACAG 79055
| ||| ||||| || || ||||| || || |||| || ||| |
Sbjct 1207069 ACTCTTGAAGTCAAACTGTACTCCATCTTCCTGCGTTTTAATAAAAGCAGGGAGGGCTAC 1207010
Query 79056 CGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCA 79115
|| || ||||||||||| || ||||| || ||| ||| ||| | ||||| ||
Sbjct 1207009 AGAGGCAAGGTTGCACACAGCAGTCTCCTCAGGGGATGAATACTCAACAATTTCGCAACA 1206950
Query 79116 CAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTC 79175
|||||| || ||||||||| || | ||||||||||||||||| ||| || ||
Sbjct 1206949 CAAATTGGAGCTCTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATC 1206890
Query 79176 CTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGAT 79235
||||||| |||| | || | || ||||| |||| || |||| ||| ||| |
Sbjct 1206889 CTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAAG 1206830
Query 79236 GTCCCGGGCCCGGACAACCTTCTTGTAC--CGACCCTGTGCGACGT------ACGTCCGG 79287
| | | ||| || | |||| || |||| | | | | || || |
Sbjct 1206829 CTTCTGAGCCT--------TTATGGTACGACGGCCCTTTCCAGCCTTTTCATACTTCTCG 1206778
Query 79288 TACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCAC 79347
|| | | | || | || || || || || | ||||| ||||| |||| ||||||
Sbjct 1206777 TAAAGAGCCTCAAATTCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCAC 1206718
Query 79348 ATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGG 79407
|| || ||| || | ||| | || || |||||| || || || ||||| |||
Sbjct 1206717 ATAAGTGTCCAATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGG 1206658
Query 79408 GCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGA 79467
||| |||| || ||||| || ||||| || | ||| || || ||||| |||| |
Sbjct 1206657 GCCATGAAAAGATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATA 1206598
Query 79468 AAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTG 79527
||||| | | ||| | ||||||||||| || |||||||| || | ||| ||||||
Sbjct 1206597 AAGTCGAACACATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTG 1206538
Query 79528 CCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATG 79587
|| || |||| |||||| || || ||||||||| | || || | |||||| | ||
Sbjct 1206537 TTCCCACCTTGGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATC 1206478
Query 79588 CCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTT-CGAGCA 79646
|| | | | |||||||| || || || || | || || ||||| | ||
Sbjct 1206477 CCATTCGAGGTTCCGTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACA 1206418
Query 79647 GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTA 79706
| || || || || |||| |||| |||||| ||||||| ||| || || |||||
Sbjct 1206417 CT-GAGCCCAATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTA 1206359
Query 79707 GATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGC---AGCTCGACATCTGTGG 79763
|| ||||| || || ||||||||||| || ||||||| |||| |||||| ||
Sbjct 1206358 AATACCCTCAATAGAATCGTCCTTCATGTTTACGAGGAAGCACGAGCT---CATCTGAGG 1206302
Query 79764 GTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCAT 79823
|| || || || ||| | | ||| |||| ||||| |||||| | || | | |||
Sbjct 1206301 CTTTGGAGTTCCTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACAT 1206242
Query 79824 CAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCG 79883
|| | ||| ||||| ||| || | ||| ||||| || || || | | ||||||
Sbjct 1206241 AAGGTTGTAAGTCTCTACGACTTTGGGTATGTCATCGCCATGAATACCAATGGAGACGCG 1206182
Query 79884 CATGA 79888
|||||
Sbjct 1206181 CATGA 1206177
Score = 201 bits (222), Expect = 1e-46
Identities = 407/600 (68%), Gaps = 8/600 (1%)
Strand=Plus/Plus
Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162
|||||| | | ||||||| ||| | | || || |||||||| ||| | || ||||
Sbjct 1206164 CCTCAGCATATGATCATGCGCGTCTCCATTGGTATTCATGGCGATGACATACCCAAAGTC 1206223
Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222
||||| ||| |||| ||| | | || | |||||| ||||| |||| ||| | | |
Sbjct 1206224 GTAGAGACTTACAACCTTATGTCCAACAAATACTTCACCCACGCCTCGCCCACCTTGTAC 1206283
Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCT---GTTTCCTAGTGGCTATGAAGGAT 19279
|| || || || || || |||||| |||| | ||||| || ||||||||
Sbjct 1206284 AATGCAGGAACTCCAAAGCCTCAGATG---AGCTCGTGCTTCCTCGTAAACATGAAGGAC 1206340
Query 19280 GACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCC 19339
|| |||||||| || ||||| || || ||| ||||||| |||||| |||| ||
Sbjct 1206341 GATTCTATTGAGGGTATTTACGATACTCTGAAGAGCTGCGCGCTCATCTCGAAGTCTGCC 1206400
Query 19340 GGGGGTATCGGGATCCACTGCTCG-AATATCCGGTCGAGTGGTACACGAATCAATGGGAC 19398
|| || || ||| || | || | || ||||| | | ||| || || ||| ||
Sbjct 1206401 GGTGGGATTGGGCTC-AGTGTGCATAACATCCGCGCTACTGGCTCATATATAGCTGGTAC 1206459
Query 19399 GAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTA 19458
||||||| | | || || | || ||| | || || | ||||||||| || | ||
Sbjct 1206460 GAACGGAACCTCGAATGGGATTCTTCCCATGTTGCGTGTGTACAACAACACTGCTCGTTA 1206519
Query 19459 CGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCA 19518
|||| |||| || || ||| || || | || ||||||||||||||||| |||||
Sbjct 1206520 CGTCGACCAAGGTGGGAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCGTGGCA 1206579
Query 19519 CGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTG 19578
| || || | || || |||| |||||| || || || | || ||||| |||
Sbjct 1206580 TGACGATGTGTTCGACTTTATCGACCTGCGCAAAAATCACGGCAAGGAAGAGATTCGCGC 1206639
Query 19579 TCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGA 19638
||||| || |||| |||| | |||||||| || || |||||| || || | |||
Sbjct 1206640 ACGCGATCTTTTCATGGCCCTTTGGATTCCCGATCTGTTCATGAAGCGCGTCAAAGCGGA 1206699
Query 19639 CGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGA 19698
| || ||| || |||||||| |||||||||||||||| | ||||| ||||| ||
Sbjct 1206700 TGCTGATTGGACACTTATGTGCCCCAACGAATGCCCTGGCCTTGCTGACGTTTACGGAGA 1206759
Score = 104 bits (114), Expect = 3e-17
Identities = 109/141 (77%), Gaps = 2/141 (1%)
Strand=Plus/Plus
Query 59973 tttGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTT 60031
|| ||| | || || || || || || ||| || ||||| |||||||| |||||||||
Sbjct 896859 TTCGCAGAGCGCCTAATTGCCTTCGC-TGCTGTTGAAGGTGTCTTCTTCAGTGGCTCGTT 896917
Query 60032 CTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGA 60091
| || |||||||| ||||||||||| |||||||| || || | ||||||||||||
Sbjct 896918 TGCATCAATCTTCTGGCTGAAAAAGCGTGGGCTCATGCCTGGGCTTACTTTCTCCAACGA 896977
Query 60092 GCTGATTTCCCGGGACGAGGG 60112
|||||||| || || |||||
Sbjct 896978 ACTGATTTCGCGCGATGAGGG 896998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524690295040
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