Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1 253 2e-62 >seq1 Length=2987201 Score = 253 bits (280), Expect = 2e-62 Identities = 1114/1745 (64%), Gaps = 71/1745 (4%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || |||| ||||||||| || |||||||| || || ||| ||||| | |||||||||| Sbjct 1207896 GTGCGCAGATAGTACATACCGGTCTTGAGCCCTTTAGACCAGCCGTAGAAGTGCATACTC 1207837 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACT--GGTCGA 78307 | |||||| ||| | ||| | ||| ||||||| || ||| |||| |||||| Sbjct 1207836 GTAAGCTTGCCCATTGTGGGGGATTGCATATAGATGTTCAG--ACTCTGACTTTGGTCGA 1207779 Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367 || | | || | | | || ||||| ||||| | | |||||| |||||||| | | Sbjct 1207778 TGAAAGGTCCTCTGCCAGCGGCCATATCGATAATCACCTTTTGACTGATCTCCCAAACTG 1207719 Query 78368 TCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTAC--------GCTCCC 78419 || ||| | | | || || || || | || | || | ||| | || ||| Sbjct 1207718 TCTTGTAGAGGTCTTTGAGGTCATCAGGAAT--CGAGGGAATGTCCTTAATCGAGCCCCC 1207661 Query 78420 ACCGGCTCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATC 78479 | ||| || | ||||| || | |||||| | || | ||| || Sbjct 1207660 AGAGGCA---ACGAGACGGTTCTTCATGTCGTCGTTCCAAAGGCCCATTTCGACAAGGTC 1207604 Query 78480 CCGGACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGAT 78539 | | || | | || | || |||||| ||||| || |||||| ||||| Sbjct 1207603 CTTCAAGAGATAAGGATTGACAATCTGGAACTCTCCGGCGAGAACACGGCGCGAGTAGAA 1207544 Query 78540 GTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGT 78599 || | ||||| |||||||| || |||| |||| ||||| | |||||| ||||| Sbjct 1207543 ATTTGAGGTGTATGGCTCGAAGCATTCATTGTAGCCCAAAATCTGAGAGGTCGACGCGGT 1207484 Query 78600 CGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGT--CTTGATCTCGACCTTT 78657 ||||| || || || | || ||||| ||||| || | | | | |||| || |||| Sbjct 1207483 AGGCATCGGAGCAACTAAGAGCGAATTACGAAGCCCGTACTTAGCCAGATC-CG-CCTTC 1207426 Query 78658 AGGCCGTCCCAA----AATTCATTCGCCGCGATC----CCCCACATGTCCGGTTGAAGGA 78709 || |||||| || | ||| | ||| ||||||| || | ||| | Sbjct 1207425 AGAGTATCCCAATCCCAAAGC--TCGGTGGGATTAACACCCCACAAATC-GTAGGAAAGC 1207369 Query 78710 T-ACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGT 78768 | ||||| ||| || || |||| | | | ||| |||| || || || || | Sbjct 1207368 TCACCCTTGGAGGCAGGACTGCCCTCGTAAGACTCATAAGGACCGTCGCGCTGAGCCAAC 1207309 Query 78769 TCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCG 78828 || ||| | || || ||||||| | || ||| ||||| ||||||||| Sbjct 1207308 TCAATCGACGCCTCCACAGCTCCGTGGTAGATAGTCTCAAAGATCTGGACGTTGAGCTCC 1207249 Query 78829 CGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGG 78888 ||||| |||||| | ||||| ||||| | |||| |||| || || || ||| Sbjct 1207248 TTCGCCTCTTCAGAGTCGAAAGGAAGGCGCAGCATGAAGAAGGCATCAGCAAGACCTTGG 1207189 Query 78889 ACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAA 78948 || || | || || || || || |||||||| | || ||| | |||||| Sbjct 1207188 ACACCCAGGGCAATGGGGCGATGACGCATGTTAGACAGACGAGCCTCAGGAACTGGGTAA 1207129 Query 78949 AAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTC-GTACAA 79007 |||| ||||||| | ||||| ||| || || | ||| | || | | || | Sbjct 1207128 TAGTTTTTGTCGATGATGTTGTTCAAGTTCCGAGTAATCACCTT-GACAACGCTGTGAAG 1207070 Query 79008 TTTGGCGAAATCAAAATG------AT-TTCCT-----TTGATGAAAGTCGGTAGGCACAG 79055 | ||| ||||| || || ||||| || || |||| || ||| | Sbjct 1207069 ACTCTTGAAGTCAAACTGTACTCCATCTTCCTGCGTTTTAATAAAAGCAGGGAGGGCTAC 1207010 Query 79056 CGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCA 79115 || || ||||||||||| || ||||| || ||| ||| ||| | ||||| || Sbjct 1207009 AGAGGCAAGGTTGCACACAGCAGTCTCCTCAGGGGATGAATACTCAACAATTTCGCAACA 1206950 Query 79116 CAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTC 79175 |||||| || ||||||||| || | ||||||||||||||||| ||| || || Sbjct 1206949 CAAATTGGAGCTCTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATC 1206890 Query 79176 CTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGAT 79235 ||||||| |||| | || | || ||||| |||| || |||| ||| ||| | Sbjct 1206889 CTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAAG 1206830 Query 79236 GTCCCGGGCCCGGACAACCTTCTTGTAC--CGACCCTGTGCGACGT------ACGTCCGG 79287 | | | ||| || | |||| || |||| | | | | || || | Sbjct 1206829 CTTCTGAGCCT--------TTATGGTACGACGGCCCTTTCCAGCCTTTTCATACTTCTCG 1206778 Query 79288 TACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCAC 79347 || | | | || | || || || || || | ||||| ||||| |||| |||||| Sbjct 1206777 TAAAGAGCCTCAAATTCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCAC 1206718 Query 79348 ATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGG 79407 || || ||| || | ||| | || || |||||| || || || ||||| ||| Sbjct 1206717 ATAAGTGTCCAATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGG 1206658 Query 79408 GCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGA 79467 ||| |||| || ||||| || ||||| || | ||| || || ||||| |||| | Sbjct 1206657 GCCATGAAAAGATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATA 1206598 Query 79468 AAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTG 79527 ||||| | | ||| | ||||||||||| || |||||||| || | ||| |||||| Sbjct 1206597 AAGTCGAACACATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTG 1206538 Query 79528 CCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATG 79587 || || |||| |||||| || || ||||||||| | || || | |||||| | || Sbjct 1206537 TTCCCACCTTGGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATC 1206478 Query 79588 CCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTT-CGAGCA 79646 || | | | |||||||| || || || || | || || ||||| | || Sbjct 1206477 CCATTCGAGGTTCCGTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACA 1206418 Query 79647 GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTA 79706 | || || || || |||| |||| |||||| ||||||| ||| || || ||||| Sbjct 1206417 CT-GAGCCCAATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTA 1206359 Query 79707 GATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGC---AGCTCGACATCTGTGG 79763 || ||||| || || ||||||||||| || ||||||| |||| |||||| || Sbjct 1206358 AATACCCTCAATAGAATCGTCCTTCATGTTTACGAGGAAGCACGAGCT---CATCTGAGG 1206302 Query 79764 GTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCAT 79823 || || || || ||| | | ||| |||| ||||| |||||| | || | | ||| Sbjct 1206301 CTTTGGAGTTCCTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACAT 1206242 Query 79824 CAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCG 79883 || | ||| ||||| ||| || | ||| ||||| || || || | | |||||| Sbjct 1206241 AAGGTTGTAAGTCTCTACGACTTTGGGTATGTCATCGCCATGAATACCAATGGAGACGCG 1206182 Query 79884 CATGA 79888 ||||| Sbjct 1206181 CATGA 1206177 Score = 201 bits (222), Expect = 1e-46 Identities = 407/600 (68%), Gaps = 8/600 (1%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 |||||| | | ||||||| ||| | | || || |||||||| ||| | || |||| Sbjct 1206164 CCTCAGCATATGATCATGCGCGTCTCCATTGGTATTCATGGCGATGACATACCCAAAGTC 1206223 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 ||||| ||| |||| ||| | | || | |||||| ||||| |||| ||| | | | Sbjct 1206224 GTAGAGACTTACAACCTTATGTCCAACAAATACTTCACCCACGCCTCGCCCACCTTGTAC 1206283 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCT---GTTTCCTAGTGGCTATGAAGGAT 19279 || || || || || || |||||| |||| | ||||| || |||||||| Sbjct 1206284 AATGCAGGAACTCCAAAGCCTCAGATG---AGCTCGTGCTTCCTCGTAAACATGAAGGAC 1206340 Query 19280 GACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCC 19339 || |||||||| || ||||| || || ||| ||||||| |||||| |||| || Sbjct 1206341 GATTCTATTGAGGGTATTTACGATACTCTGAAGAGCTGCGCGCTCATCTCGAAGTCTGCC 1206400 Query 19340 GGGGGTATCGGGATCCACTGCTCG-AATATCCGGTCGAGTGGTACACGAATCAATGGGAC 19398 || || || ||| || | || | || ||||| | | ||| || || ||| || Sbjct 1206401 GGTGGGATTGGGCTC-AGTGTGCATAACATCCGCGCTACTGGCTCATATATAGCTGGTAC 1206459 Query 19399 GAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTA 19458 ||||||| | | || || | || ||| | || || | ||||||||| || | || Sbjct 1206460 GAACGGAACCTCGAATGGGATTCTTCCCATGTTGCGTGTGTACAACAACACTGCTCGTTA 1206519 Query 19459 CGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCA 19518 |||| |||| || || ||| || || | || ||||||||||||||||| ||||| Sbjct 1206520 CGTCGACCAAGGTGGGAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCGTGGCA 1206579 Query 19519 CGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTG 19578 | || || | || || |||| |||||| || || || | || ||||| ||| Sbjct 1206580 TGACGATGTGTTCGACTTTATCGACCTGCGCAAAAATCACGGCAAGGAAGAGATTCGCGC 1206639 Query 19579 TCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGA 19638 ||||| || |||| |||| | |||||||| || || |||||| || || | ||| Sbjct 1206640 ACGCGATCTTTTCATGGCCCTTTGGATTCCCGATCTGTTCATGAAGCGCGTCAAAGCGGA 1206699 Query 19639 CGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGA 19698 | || ||| || |||||||| |||||||||||||||| | ||||| ||||| || Sbjct 1206700 TGCTGATTGGACACTTATGTGCCCCAACGAATGCCCTGGCCTTGCTGACGTTTACGGAGA 1206759 Score = 104 bits (114), Expect = 3e-17 Identities = 109/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 59973 tttGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTT 60031 || ||| | || || || || || || ||| || ||||| |||||||| ||||||||| Sbjct 896859 TTCGCAGAGCGCCTAATTGCCTTCGC-TGCTGTTGAAGGTGTCTTCTTCAGTGGCTCGTT 896917 Query 60032 CTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGA 60091 | || |||||||| ||||||||||| |||||||| || || | |||||||||||| Sbjct 896918 TGCATCAATCTTCTGGCTGAAAAAGCGTGGGCTCATGCCTGGGCTTACTTTCTCCAACGA 896977 Query 60092 GCTGATTTCCCGGGACGAGGG 60112 |||||||| || || ||||| Sbjct 896978 ACTGATTTCGCGCGATGAGGG 896998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524690295040