Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1 190 2e-43
>seq1
Length=2987201
Score = 190 bits (210), Expect = 2e-43
Identities = 396/583 (68%), Gaps = 10/583 (2%)
Strand=Plus/Plus
Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239
|||||| || | ||||||||||| || | ||||| || || || ||| | || |
Sbjct 1206164 CCTCAGCATATGATCATGCGCGTCTCCATTGGTATTCATGGCGATGAC-ATACCCAAAGT 1206222
Query 53240 CGT-GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTT 53298
||| ||||| ||| || | ||| | | || ||||| || |||||| |||| ||| |||
Sbjct 1206223 CGTAGAGACTTACAACCTTATGTCCAACAAATACTTCACCCACGCCTCGCCCACCTTGTA 1206282
Query 53299 CAACGCTGGTACGAATCACCCTCAGATGTCGAGCT---GCTTCCTGGTGGCGATGAAGGA 53355
||| || || || | ||||||||| |||| ||||||| || ||||||||
Sbjct 1206283 CAATGCAGGAACTCCAAAGCCTCAGATG---AGCTCGTGCTTCCTCGTAAACATGAAGGA 1206339
Query 53356 TGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTC 53415
|| || || || || || ||||| || || ||| || || | |||||| |||| |
Sbjct 1206340 CGATTCTATTGAGGGTATTTACGATACTCTGAAGAGCTGCGCGCTCATCTCGAAGTCTGC 1206399
Query 53416 GGGTGGTATCGGTATCCACTGCTCG-AACGTCCGTGCGAACGGCACACCAATCAAGGGGA 53474
||||| || || || | || | ||| |||| || | ||| || || || |
Sbjct 1206400 CGGTGGGATTGGGCTC-AGTGTGCATAACATCCGCGCTACTGGCTCATATATAGCTGGTA 1206458
Query 53475 CGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGT 53534
||||||| | | |||| || | || ||| | || || | ||||||||| || || |
Sbjct 1206459 CGAACGGAACCTCGAATGGGATTCTTCCCATGTTGCGTGTGTACAACAACACTGCTCGTT 1206518
Query 53535 ACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGC 53594
||||| |||| ||||| ||||| || | || ||||||||||||||||||||||
Sbjct 1206519 ACGTCGACCAAGGTGGGAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCGTGGC 1206578
Query 53595 ACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCT 53654
| | ||| | | || ||| |||| ||||| ||||| || | |||||||| |||
Sbjct 1206579 ATGACGATGTGTTCGACTTTATCGACCTGCGCAAAAATCACGGCAAGGAAGAGATTCGCG 1206638
Query 53655 GCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGG 53714
|| || || || | || || |||||||| || || |||||| | || | ||
Sbjct 1206639 CACGCGATCTTTTCATGGCCCTTTGGATTCCCGATCTGTTCATGAAGCGCGTCAAAGCGG 1206698
Query 53715 ACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCT 53757
| | || ||| || |||||||| ||||| ||||| |||||
Sbjct 1206699 ATGCTGATTGGACACTTATGTGCCCCAACGAATGCCCTGGCCT 1206741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215890556800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |