Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq3 125 4e-24
>seq3
Length=2072284
Score = 125 bits (138), Expect = 4e-24
Identities = 169/234 (72%), Gaps = 6/234 (3%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
|||||| | ||||| | |||||||| |||||| ||||||||| ||||| || || ||
Sbjct 540875 GCCGCCACGGAGACGTAGAACCAAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGA 540816
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || || | || ||||| || || || ||||| || | |||||||||||| || ||
Sbjct 540815 AAGAGTACGACCATCGTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGG 540756
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCT---CTC 34655
| ||| |||||||| | |||||| || | | ||| ||| ||||| |||
Sbjct 540755 AATTCCTTCCTTGTCAGAGATCTTACTCTTGACAGCCTCAATGGTG---TCGCTAGACTC 540699
Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
||||| | || || || || || |||||||| || | ||||||||||| ||
Sbjct 540698 TACTTCTAGCGTAATGGTCTTGCCCGTTAACGTCTTGATGAAAATCTGCATCTT 540645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729538627728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |