Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq3 102 7e-17
seq2 98.7 9e-16
>seq3
Length=2072284
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || | || || | || |||||| | ||||| || ||||| || | |
Sbjct 540648 ATGCAGATTTTCATCAAGACGTTAACGGGCAAGACCATTACGCTAGAAGTAGAGTCTAGC 540707
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | |||||| ||||| || || ||||| ||||| || || || || |||
Sbjct 540708 GACACCATTGAGGCTGTCAAGAGTAAGATCTCTGACAAGGAAGGAATTCCCCCTGACCAA 540767
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | || ||||| || | || || || || ||||||| ||||||
Sbjct 540768 CAGCGTCTCATCTTTGCTGGCAAGCAGCTTGACGATGGTCGTACTCTTTCCGACTACAAC 540827
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216
|| ||||||||||| || | ||||||||| | ||| | || || ||||
Sbjct 540828 ATCCAAAAGGAGTCCACTCTGCATTTGGTTCTACGTCTCCGTGGCGGCA 540876
>seq2
Length=2890200
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || | ||||| ||||| || ||| ||||||| || || ||||| ||
Sbjct 724549 ATGCAGATCTTCATTAAAACCCTGACGGGTAAGACTATTACCCTCGAGGTGGAGTCGAGT 724490
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || ||| || || || || || || || ||||| || || || ||
Sbjct 724489 GACACCATCGAGGCTGTGAAGAGCAAGATCAGCGATAAGGAGGGCATCCCGCCTGACCAG 724430
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||| || | || || | ||| ||||||| ||||||
Sbjct 724429 CAGCGTCTGATCTTCGCCGGCAAGCAGCTTGATGATGGCCGCACCCTTTCCGACTACAAC 724370
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| |||||||| || | || ||||| | ||| | || |||||
Sbjct 724369 ATTCAGAAGGAGTCTACTCTTCACTTGGTGCTCCGTCTCCGTGGTGG 724323
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918313016320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |