Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3 102 7e-17 seq2 98.7 9e-16 >seq3 Length=2072284 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || | || || | || |||||| | ||||| || ||||| || | | Sbjct 540648 ATGCAGATTTTCATCAAGACGTTAACGGGCAAGACCATTACGCTAGAAGTAGAGTCTAGC 540707 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | |||||| ||||| || || ||||| ||||| || || || || ||| Sbjct 540708 GACACCATTGAGGCTGTCAAGAGTAAGATCTCTGACAAGGAAGGAATTCCCCCTGACCAA 540767 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| || | || || || || ||||||| |||||| Sbjct 540768 CAGCGTCTCATCTTTGCTGGCAAGCAGCTTGACGATGGTCGTACTCTTTCCGACTACAAC 540827 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 || ||||||||||| || | ||||||||| | ||| | || || |||| Sbjct 540828 ATCCAAAAGGAGTCCACTCTGCATTTGGTTCTACGTCTCCGTGGCGGCA 540876 >seq2 Length=2890200 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || | ||||| ||||| || ||| ||||||| || || ||||| || Sbjct 724549 ATGCAGATCTTCATTAAAACCCTGACGGGTAAGACTATTACCCTCGAGGTGGAGTCGAGT 724490 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || ||| || || || || || || || ||||| || || || || Sbjct 724489 GACACCATCGAGGCTGTGAAGAGCAAGATCAGCGATAAGGAGGGCATCCCGCCTGACCAG 724430 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || | || || | ||| ||||||| |||||| Sbjct 724429 CAGCGTCTGATCTTCGCCGGCAAGCAGCTTGATGATGGCCGCACCCTTTCCGACTACAAC 724370 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| |||||||| || | || ||||| | ||| | || ||||| Sbjct 724369 ATTCAGAAGGAGTCTACTCTTCACTTGGTGCTCCGTCTCCGTGGTGG 724323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918313016320