Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 3e-15 >seq3 Length=2072284 Score = 96.9 bits (106), Expect = 3e-15 Identities = 164/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 6842 ATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATAC 6901 ||||| | | || |||||| | || | || | |||||| || |||| || |||||| Sbjct 1425322 ATCACCTCATTCAACTGGTCAACACCTTCACCTGTATAGTCTGCATCGCAGCCACGATAC 1425381 Query 6902 TCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGA 6961 || || ||||| || | ||||||||| || || ||||| ||||||||||||||| | Sbjct 1425382 TCTGCACCAAAATGGCGCCACTGGAATCCATAAACCGGTCCCAAGTCGCCCTCCCTGTTA 1425441 Query 6962 GATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACC 7021 || || ||| || || || || ||||||| ||| | | |||||||| | | Sbjct 1425442 CTTGTGAGCCCACGTTTATCAAGGAAGTCTCTGCTCCCATTTCCATCCCAGATATGTATA 1425501 Query 7022 CCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCT 7079 ||| | || | ||| || | | || | ||| | |||||||| |||||||||| Sbjct 1425502 TCCCTCGCTGACAACTCTTTCGCATCGGTTGAGCCCTTGACGAACCAAAGCAGCTCCT 1425559 Score = 96.9 bits (106), Expect = 3e-15 Identities = 164/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 34266 AGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGG 34325 |||||||||| |||||||| | ||| | || | | || ||| | || | ||| Sbjct 1425559 AGGAGCTGCTTTGGTTCGTCAAGGGCTCAACCGATGCGAAAGAGTTGTCAGCGAGGGATA 1425500 Query 34326 TGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTC 34385 | | |||||||| | | ||| ||||||| || || || || ||| || || | Sbjct 1425499 TACATATCTGGGATGGAAATGGGAGCAGAGACTTCCTTGATAAACGTGGGCTCACAAGTA 1425440 Query 34386 GGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGT 34445 ||||||||||||||| ||||| || || ||||||||| | || ||||| || |||| Sbjct 1425439 ACAGGGAGGGCGACTTGGGACCGGTTTATGGATTCCAGTGGCGCCATTTTGGTGCAGAGT 1425380 Query 34446 ATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGAT 34503 |||| || |||| || |||||| | || | || | |||||| || | | ||||| Sbjct 1425379 ATCGTGGCTGCGATGCAGACTATACAGGTGAAGGTGTTGACCAGTTGAATGAGGTGAT 1425322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262310347520