Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq3 96.9 3e-15
>seq3
Length=2072284
Score = 96.9 bits (106), Expect = 3e-15
Identities = 164/238 (69%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 6842 ATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATAC 6901
||||| | | || |||||| | || | || | |||||| || |||| || ||||||
Sbjct 1425322 ATCACCTCATTCAACTGGTCAACACCTTCACCTGTATAGTCTGCATCGCAGCCACGATAC 1425381
Query 6902 TCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGA 6961
|| || ||||| || | ||||||||| || || ||||| ||||||||||||||| |
Sbjct 1425382 TCTGCACCAAAATGGCGCCACTGGAATCCATAAACCGGTCCCAAGTCGCCCTCCCTGTTA 1425441
Query 6962 GATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACC 7021
|| || ||| || || || || ||||||| ||| | | |||||||| | |
Sbjct 1425442 CTTGTGAGCCCACGTTTATCAAGGAAGTCTCTGCTCCCATTTCCATCCCAGATATGTATA 1425501
Query 7022 CCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCT 7079
||| | || | ||| || | | || | ||| | |||||||| ||||||||||
Sbjct 1425502 TCCCTCGCTGACAACTCTTTCGCATCGGTTGAGCCCTTGACGAACCAAAGCAGCTCCT 1425559
Score = 96.9 bits (106), Expect = 3e-15
Identities = 164/238 (69%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 34266 AGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGG 34325
|||||||||| |||||||| | ||| | || | | || ||| | || | |||
Sbjct 1425559 AGGAGCTGCTTTGGTTCGTCAAGGGCTCAACCGATGCGAAAGAGTTGTCAGCGAGGGATA 1425500
Query 34326 TGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTC 34385
| | |||||||| | | ||| ||||||| || || || || ||| || || |
Sbjct 1425499 TACATATCTGGGATGGAAATGGGAGCAGAGACTTCCTTGATAAACGTGGGCTCACAAGTA 1425440
Query 34386 GGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGT 34445
||||||||||||||| ||||| || || ||||||||| | || ||||| || ||||
Sbjct 1425439 ACAGGGAGGGCGACTTGGGACCGGTTTATGGATTCCAGTGGCGCCATTTTGGTGCAGAGT 1425380
Query 34446 ATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGAT 34503
|||| || |||| || |||||| | || | || | |||||| || | | |||||
Sbjct 1425379 ATCGTGGCTGCGATGCAGACTATACAGGTGAAGGTGTTGACCAGTTGAATGAGGTGAT 1425322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448262310347520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |