Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq2 113 4e-20 seq1 96.9 3e-15 >seq2 Length=2890200 Score = 113 bits (124), Expect = 4e-20 Identities = 155/213 (73%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || || ||| || || || || || |||| ||| || || | ||||| Sbjct 724340 CACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCATC 724399 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 |||||| ||||| || || || |||||||||||||| | || | || ||| || || | Sbjct 724400 AAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCGCT 724459 Query 39195 GAT-TTTCTGTT-TGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252 ||| || || || ||| ||| | || || ||||||||||| || | || ||| | Sbjct 724460 GATCTTGCTCTTCACAGCCTCG--ATGGTGTCACTCGACTCCACCTCGAGGGTAATAGTC 724517 Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 || |||||||| ||||||| ||||| |||||| Sbjct 724518 TTACCCGTCAGGGTTTTAATGAAGATCTGCATC 724550 >seq1 Length=2987201 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | |||||| || |||||| ||| || || || || || || | || || || | Sbjct 2570391 GCGAAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCC 2570332 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || || ||||| ||||| || || || |||||||||||||| | || | || || || Sbjct 2570331 ATCGTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCCTTCCTT 2570272 Query 39189 GTCCATGAT-TTTCTGTT-TGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTG 39246 ||| |||| || || || ||| ||| | ||| ||||| ||||| || || | ||| Sbjct 2570271 GTCGCTGATCTTGCTCTTCACAGCCTCG--ATCGTGTCGCTAGACTCGACCTCAAGGGTG 2570214 Query 39247 ATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 ||| | || ||||| || || || | ||||| |||||| Sbjct 2570213 ATAGTCTTCCCCGTGAGGGTCTTGATGAAGATCTGCATC 2570175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545516238608