Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq1 241 2e-58
seq3 100 4e-16
>seq1
Length=2987201
Score = 241 bits (266), Expect = 2e-58
Identities = 705/1070 (66%), Gaps = 16/1070 (1%)
Strand=Plus/Minus
Query 76351 CTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAAC 76410
|||||| ||||||||||| | ||||||||||| ||| | ||||| || || |
Sbjct 1206937 CTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCAT 1206878
Query 76411 AAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTT 76469
|| || | ||||| || |||| | || | ||||| | ||| | | ||| ||| |
Sbjct 1206877 GAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAA-GCTTCTGAGCCT 1206819
Query 76470 TTATTATA-GATTTGTATCGCTTCTCTCTTTCATA-TTGT-GTATATAACCGTTCAAATT 76526
|||| || || | | || ||||||| || | ||| | | || |||||||
Sbjct 1206818 TTATGGTACGACGGCCCTTTCCAGCCT-TTTCATACTTCTCGTAAAGAGCC--TCAAATT 1206762
Query 76527 CATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCAC 76586
||||||| |||| ||| | | ||||| ||||| || || ||||| | || ||| |||
Sbjct 1206761 CATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTCCAATCAG 1206702
Query 76587 CATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTC 76646
|||| | || || || ||||| || ||||| || ||||| || || || || ||||| |
Sbjct 1206701 CATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAAGATCGC 1206642
Query 76647 GGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAG 76706
| | | | ||||| || || ||| || || || | || || | | |||
Sbjct 1206641 GTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACACATCGT 1206582
Query 76707 AATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTA 76766
|||||| || || || || || || | |||| || || || || || || || || |
Sbjct 1206581 CATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTTGGTCGA 1206522
Query 76767 TATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCAT 76826
|| | |||||||| || || || | |||||| |||| ||| || || || || || |
Sbjct 1206521 CGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAGGTTCCGT 1206462
Query 76827 TTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTC 76886
| || |||| ||||| ||| || || || ||| | | || || || || |
Sbjct 1206461 TCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTGAGCCCAATCCCAC 1206402
Query 76887 CTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTAT 76946
| || || ||||| || || |||| |||| || || || || ||||| ||| ||
Sbjct 1206401 CGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCTCAATAGAAT 1206342
Query 76947 CATCCATCATGTTAAGAAGAAAACAGCTAG-ACATTTGATGATGAACAGTTCCTGCATTA 77005
| ||| ||||||| | || || || | || ||| ||| | | ||||||||||||
Sbjct 1206341 CGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTTCCTGCATTG 1206283
Query 77006 AACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATA 77065
|||| || || || || || ||||| |||| | || | || ||||| || || |
Sbjct 1206282 TACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAAGTCTCTACG 1206223
Query 77066 ACTGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACGCATCAACATATGCTGAG 77123
||| || ||| ||| | |||||| || | | ||| ||||| | |||||||||||
Sbjct 1206222 ACT--TTGGGTATGTCATCGCCATGAATACCAATGGAGACGCGCATGATCATATGCTGAG 1206165
Query 77124 GTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAAC 77183
| || || | || ||||| ||||| |||||| || || | ||||| ||||
Sbjct 1206164 GGCGCTCGTGAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGCGTTTTGAAAC 1206105
Query 77184 CAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTAT 77243
||||||||||||| ||||| | || |||| || | || || || | || ||
Sbjct 1206104 CAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGCTCTTCAGCAT 1206045
Query 77244 ATTTGGTAACAATATC-CATGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTA 77302
|| |||| || || | | | ||||| |||||||| | | |||| |
Sbjct 1206044 GCTTCTGGACAACGTCGTATACCTCTTG-GGAAATCATTGGAGAATGCTTGTCATTGCGA 1205986
Query 77303 GGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTG 77362
||||| |||||| || | || || || || | ||| || | ||||||||| | |||
Sbjct 1205985 GGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTTTTTTTGTCTGTTTG 1205926
Query 77363 TGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412
|| ||||| || || || |||| ||||| || ||||||||||| ||
Sbjct 1205925 TGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAGGGTG 1205876
Score = 168 bits (186), Expect = 1e-36
Identities = 402/606 (66%), Gaps = 14/606 (2%)
Strand=Plus/Minus
Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688
||| |||||||| || | || ||||| | ||| | |||||| || || || ||
Sbjct 897020 ACAGGCAAAATCGGTGTGCATACCCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAG 896961
Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748
||||||||| || ||||||||||| ||||| || || | || || || ||| |||||
Sbjct 896960 CCCAGGCATGAGCCCACGCTTTTTCAGCCAGAAGATTGATGCAAACGAGCCACTGAAGAA 896901
Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA-- 46806
| ||||| ||||| ||||| || | || | |||| || | | | ||| |
Sbjct 896900 GACACCTTCAACAGCAGCGAAGGCAATTAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCT 896841
Query 46807 -ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATT 46865
||||| | | ||||| | |||||| || | | || || || || || ||
Sbjct 896840 GATCCAACGAAGTGCCCACTTAGCCTTCTTGCGAATGGAGGGAATGGTGAAGATGGCGTT 896781
Query 46866 AAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACAT 46925
|| ||||||| || | ||| ||||| || |||||||| || | |||| ||| |
Sbjct 896780 GAACAGAAAGTCGGCCTCTTTACTGTCTTTCACGTATGTATCAATCAGAAGAGAATAAGT 896721
Query 46926 TTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 46985
|| || ||||||||||| || ||||| || ||||| |||||| | || || | |||
Sbjct 896720 CTCAGAGTGAATGTTTTCCATCATAATCTGGAAGCCGTAGAAACATTTGGCCTCGGGAAT 896661
Query 46986 CTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGC 47045
||||| || ||||| ||| | ||||||||| || || ||||||||||||||
Sbjct 896660 ACCAACCTCACCACTGAATCGCTCAACGAGATTCTCATTGACAATGCCATCACTAGCAGC 896601
Query 47046 AAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTT---ATTCCA 47102
||| || || | ||| | | ||| ||| | || || |||| || | |||
Sbjct 896600 AAAGAAAGCAAGAACACGGGACACAAAGTATCTCTCGTCATCGTTCAGCTTGTGCTCCCA 896541
Query 47103 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTT 47162
||| | | || || || || | ||| || || ||||| ||||||||||| |||||
Sbjct 896540 GTCGTGAGTGTCCTTACCTAGGTCAATTTCCTCGGCCGTCCAAAATGACGCCTCGGCTTT 896481
Query 47163 TTTATACATATTCCATATATCACGA----TATTGGATCGGAAAAATAACAAATCTATTTG 47218
|| || | ||| || ||| || | |||||| || | |||||| | ||||
Sbjct 896480 CTTGTAAGCCTGCCAAAT----CGAGTTGTACTTGATCGGGAACAAAACAAACCGGTTTG 896425
Query 47219 GATTTT 47224
||||||
Sbjct 896424 GATTTT 896419
Score = 107 bits (118), Expect = 3e-18
Identities = 309/469 (66%), Gaps = 10/469 (2%)
Strand=Plus/Minus
Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431
|||| ||||| ||||| || | || || | || || || |||||||||||||| || |
Sbjct 1207931 CAACAGTGAATTGAATCGGTGCCGAAGCGGCTTGAGTGCGCAGATAGTACATACCGGTCT 1207872
Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTG--GAATAACTCGGATC 75489
| || || | ||| |||||||| ||||| || || || ||| | | ||||
Sbjct 1207871 TGAGCCCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAGCTTGCCCATTGTGGGGGATT 1207812
Query 75490 GGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCAT 75549
| |||| || |||| ||||||||| |||||||||| |||||| |||| |||||
Sbjct 1207811 G--CATATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCAT 1207754
Query 75550 TTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATC 75609
| ||||| ||||||| || ||||||| || ||| | | | ||||| |||||
Sbjct 1207753 ATCGATAATCACCTTTTGACTGATCTCCCAAACTGTCTTGTAGAGGTCTTTGAGGTCATC 1207694
Query 75610 TGGAA--GATTTGTATTT--TGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCT 75665
|||| || | || | | ||| || || ||| | | | ||||| || |
Sbjct 1207693 AGGAATCGA-GGGAATGTCCTTAATCGAGCCCCCAGAGGCAACGAGACGGTTCTTCATGT 1207635
Query 75666 CATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAA 75725
| || ||||| | | ||| | | | | ||||| |||||| ||||| || |
Sbjct 1207634 CGTCGTTCCAAAGGCCCATTTCGACAAGGTCCTTCAAGAGATAAGGATTGACAATCTGGA 1207575
Query 75726 ATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCAT 75785
| ||||| | | || | || | ||| | ||| ||| ||||| || | ||||||
Sbjct 1207574 ACTCTCCGGCGAGAACACGGCGCGAGTAGAAATTTGAGGTGTATGGCTCGAAGCATTCAT 1207515
Query 75786 TGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAA 75834
||| |||||||| |||| || || || || ||||| || || || ||
Sbjct 1207514 TGTAGCCCAAAATCTGAGAGGTCGACGCGGTAGGCATCGGAGCAACTAA 1207466
>seq3
Length=2072284
Score = 100 bits (110), Expect = 4e-16
Identities = 143/200 (72%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 76616 TCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTC 76675
|||||||||||||| ||| |||||| || || | | | || || ||||| |||
Sbjct 622063 TCAGGTATCCATAGCGCATAAAATAGGTCGCGTGCCCGATACTCATCCTTTCCGTGATTT 622122
Query 76676 TTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATA 76735
|| |||||||||| |||| | | |||||| | ||||||||| ||||| | || | ||
Sbjct 622123 TTCTTAAGATCTAAGAACCCAAAAATATCTGCATGCCATGGCTCTAG---TGTCACACTA 622179
Query 76736 A---CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACT 76792
| |||| || | ||| || || |||||||| | ||||| || |||||| | |||
Sbjct 622180 ATTGCACCAGGCCTTTTGTTGCCGCCCTGATCAACGAATCTGCAAGCGTTATTGAATACT 622239
Query 76793 CTCAACATTGGAATAATGCC 76812
| ||||| |||| ||| ||
Sbjct 622240 CGTAACATGGGAACAATCCC 622259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712934257413120
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