Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1 140 2e-28 seq3 107 1e-18 >seq1 Length=2987201 Score = 140 bits (154), Expect = 2e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| |||||| |||||| ||||||||||| || | ||| ||| | ||||| Sbjct 2570385 CACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCGTC 2570326 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||||| ||||||||| || | || | |||||||| || | Sbjct 2570325 GAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCGCT 2570266 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | || |||||| || || ||||| | || || ||||| Sbjct 2570265 GATCTTGCTCTTCACAGCCTCGATCGTGTCGCTAGACTCGACCTCAAGGGTGATAGTCTT 2570206 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||||||| | |||||| ||||| Sbjct 2570205 CCCCGTGAGGGTCTTGATGAAGATCTGCAT 2570176 >seq3 Length=2072284 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| || || ||| |||||||||||||||||| |||| || || | ||||| Sbjct 540856 ACCAAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGACCATCGTCA 540797 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||| | |||||| || || | || | |||||||| || | Sbjct 540796 AGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGGAATTCCTTCCTTGTCAGAG 540737 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | ||||||||| || || || || | |||||| ||||| Sbjct 540736 ATCTTACTCTTGACAGCCTCAATGGTGTCGCTAGACTCTACTTCTAGCGTAATGGTCTTG 540677 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | ||||| | ||| || ||||| Sbjct 540676 CCCGTTAACGTCTTGATGAAAATCTGCAT 540648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990329801872