Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2 104 5e-17 >seq2 Length=4956242 Score = 104 bits (114), Expect = 5e-17 Identities = 174/252 (69%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 || || || ||||| ||| | |||||||||||| | ||| ||| | |||||| | Sbjct 3220072 ATTATCACTGAAGCCGTTATTATTGAAAAGGAGTTCTTGACTGATGCTTTGCCATGTAGT 3220131 Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 ||| | || ||||| || | |||||| | || ||||| || || || || ||| | | Sbjct 3220132 CTTTTGGGAATGAATGCCAAGCTTATGTGCCAATACATTGAGTTTGTTGCTGACAGATTA 3220191 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 || || | |||||| || || || || || ||| |||||||||| || ||||| Sbjct 3220192 TTACTTTCCCTTGGTAACAGTAAGGTATATAATGCTACCAACCCCTTTGATTTCATGGAA 3220251 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| || | || |||||||||||||| || ||| | || ||||||||| | | Sbjct 3220252 AACATCTCATTGTCTGGCAAGACCAACTTCTTTGAGAAGAGAGTGTCTGACTATCAAAAG 3220311 Query 230626 CCTGGTGTGATG 230637 | ||||| ||| Sbjct 3220312 GCAGGTGTCATG 3220323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823945786520