Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq2 104 5e-17
>seq2
Length=4956242
Score = 104 bits (114), Expect = 5e-17
Identities = 174/252 (69%), Gaps = 0/252 (0%)
Strand=Plus/Plus
Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445
|| || || ||||| ||| | |||||||||||| | ||| ||| | |||||| |
Sbjct 3220072 ATTATCACTGAAGCCGTTATTATTGAAAAGGAGTTCTTGACTGATGCTTTGCCATGTAGT 3220131
Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505
||| | || ||||| || | |||||| | || ||||| || || || || ||| | |
Sbjct 3220132 CTTTTGGGAATGAATGCCAAGCTTATGTGCCAATACATTGAGTTTGTTGCTGACAGATTA 3220191
Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565
|| || | |||||| || || || || || ||| |||||||||| || |||||
Sbjct 3220192 TTACTTTCCCTTGGTAACAGTAAGGTATATAATGCTACCAACCCCTTTGATTTCATGGAA 3220251
Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625
||| || | || |||||||||||||| || ||| | || ||||||||| | |
Sbjct 3220252 AACATCTCATTGTCTGGCAAGACCAACTTCTTTGAGAAGAGAGTGTCTGACTATCAAAAG 3220311
Query 230626 CCTGGTGTGATG 230637
| ||||| |||
Sbjct 3220312 GCAGGTGTCATG 3220323
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823945786520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |