Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq3 201 8e-47
>seq3
Length=2773601
Score = 201 bits (222), Expect = 8e-47
Identities = 512/766 (67%), Gaps = 31/766 (4%)
Strand=Plus/Plus
Query 101520 CATGTTATTTTTCTTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTT 101579
||| |||| || ||| || | ||| | ||| | ||| ||| || || ||||| ||
Sbjct 791296 CATATTATATTA-TTACACCGACATTTTCATCTCAATCTTAGATTGGGGTTTATATCCTT 791354
Query 101580 CTAATATAATGTCATC-TGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTA 101638
| | | || || || | ||| ||| |||||||| | | || ||| ||||| |
Sbjct 791355 CGACAACAAAATCCTCATACTTGAAA-TCATCAATATCGGTGATATCTCTTGCAAAGCGC 791413
Query 101639 AGTGTTGGAAACGGTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCT 101698
|| || || || | |||| |||| || | |||| ||| || || |||| || |||
Sbjct 791414 AGAGTAGGGAAGTCTGTAGGGGTTCTCGCAATTTGCACTTTGAGCGCTTCAACATGGTCT 791473
Query 101699 ACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATT--AGTGA 101756
| |||| |||||||| || || || || ||||| || ||| || | ||| | |
Sbjct 791474 GCGTAGACATGAGCATCGCCCATTGTGTGAATAAAATCACCA--CATTCTATTCCACAAA 791531
Query 101757 CATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACC 101816
| | ||| ||||| ||||| | || ||| ||||| |||||||||||||| || |
Sbjct 791532 CCTTAGCGATCATCTTCGTTAACAAAGCATAAGAGGCAATATTAAATGGCACTCCCAAGC 791591
Query 101817 CCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTT------CCATCACAGA--- 101867
|||||||| ||||||||| | ||||| ||||||| | |||| || ||
Sbjct 791592 CCATATCACAACTTCTTTGATATAACTGACAAGAAAGCTCTGGCTTACCATTACGGAAGC 791651
Query 101868 ---CATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAA 101924
||||||| ||| ||||| |||||||| || | |||| | || || |
Sbjct 791652 TTACATAAAACTGAGAAAATACGTGACAAGGTGGAAGAGCCATATCGTTCATATCGGCGG 791711
Query 101925 CATTCCAAGCACACATTAACATCCTTCTATC-TGTAGGGT----TTGTTTTTATAGTATC 101979
|||||| || |||| | || | ||| || | | | || ||| |||| | |||||
Sbjct 791712 GATTCCATGCTGACATGATTATTCGTCTGTCATATGGTGTCTCCTTGATTTT-TCGTATC 791770
Query 101980 AATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATA 102039
| | ||| | ||| || ||||||| || ||||| | | | | |||
Sbjct 791771 ACTT--CTGCC--AGTTGATCTACTCCTTTACCAGAGTAATCAGTATCGCAATCCTCATA 791826
Query 102040 TTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCT 102099
|| || || ||||| ||||| || || |||||||| |||||||||||||| ||| |||
Sbjct 791827 TTTGGCGCCAAAATGTCTCCATTGGAAACCATACACGGGTCCAAGATCTCCCTCACGTCT 791886
Query 102100 GTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCAC 102159
|| | | || | || || ||||| || | |||||| |||||||||| || ||
Sbjct 791887 GTGTTCTAGTCCTCGCTTGTCCAAAAACTCTCGACTTCCATTGCCATCCCAAATATGAAC 791946
Query 102160 GCCAGCTG-CTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTT 102218
||| ||| | || ||| ||| |||||||| ||| ||| |||||| || |||||||
Sbjct 791947 GCC-TCTGTCAGAAAGCAATTTCGAATCAGTAGACCCTTTGACAAACCATAATAGTTCTT 792005
Query 102219 CAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264
| | |||||| | || |||||| ||||||||||||||||| ||
Sbjct 792006 CCAAGACACCTTTGAAATATACTCGTTTAGTAGTTAAAAGTGGCAA 792051
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361251182389004
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |