Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq3 123 3e-23 >seq3 Length=2773601 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| || || || ||||| |||| ||||| | | Sbjct 155033 ATGCAAATCTTCGTCAAGACCCTCACTGGTAAGACTATCACGCTCGAGGTCGAGTCTTCG 155092 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| |||||||| ||| | ||||| Sbjct 155093 GACACCATTGATAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAA 155152 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| ||||||||| || || || ||||| || |||| || || ||| |||||||||| Sbjct 155153 CAAAGACTCATCTTTGCCGGTAAGCAGCTCGAAGACGGTCGTACTCTCTCCGACTACAAC 155212 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| | || || || Sbjct 155213 ATCCAGAAGGAGTCGACCCTCCA 155235 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || || || || ||||||||| |||| ||||| | |||||| | | Sbjct 1977481 TTCGTCAAGACCCTTACTGGTAAGACCATCACCCTCGAGGTCGAGTCTTCCGACACCATT 1977540 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| ||||| || ||| | || || ||||| || Sbjct 1977541 GACAACG-TCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCAGATCAACAACGTCT 1977599 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || || || || || || | | ||||| ||||||||||| || || Sbjct 1977600 TATCTTCGCCGGTAAGCAACTCGAGGATGGCAGAACCCTTTCTGACTACAACATTCAAAA 1977659 Query 40878 GGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||| | || || || || || | || ||||| || || Sbjct 1977660 GGAGTCGACTCTCCACCTTGTCCTCCGTTTGAGAGGTGG 1977698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219174239040