Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq3 163 2e-35
>seq3
Length=2773601
Score = 163 bits (180), Expect = 2e-35
Identities = 449/683 (66%), Gaps = 24/683 (4%)
Strand=Plus/Plus
Query 96964 TTAAAATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGCCTG--G 97021
|| |||||||||||| | || | ||| ||||| || || ||||| | ||| |
Sbjct 791375 TTGAAATCATCAATATCGGTGATATCTCTTGCAAAGCGCAGAGTAGGGAA--GTCTGTAG 791432
Query 97022 GAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTC 97081
| |||| || || ||| || |||| || |||| || | | || | |||||||| |
Sbjct 791433 GGGTTCTCGCAATTTGCACTTTGAGCGCTTCAACATGGTCTGCGTAGACATGAGCATCGC 791492
Query 97082 CTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTA 97141
| | ||||||||||| || ||| ||| || || | |||||||| ||||
Sbjct 791493 CCATTGTGTGAATAAAATCACCACATTCTATTCCACAAACCTTAGCGATCATCTTCGTTA 791552
Query 97142 ATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGAT 97201
| | || ||| ||||| ||||| ||||| || | ||||||||| ||||||||
Sbjct 791553 ACAAAGCATAAGAGGCAATATTAAATGGCACTCCCAAGCCCATATCACAACTTCTTTGAT 791612
Query 97202 ATAACTGACAGGAAAGCTTT------CCATCACACA------CATAAAACTGACTCAATA 97249
|||||||||| ||||||| | |||| || | ||||||||||| ||||
Sbjct 791613 ATAACTGACAAGAAAGCTCTGGCTTACCATTACGGAAGCTTACATAAAACTGAGAAAATA 791672
Query 97250 CATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACA 97309
| ||||| || || | ||||| | | ||| | |||||| || |||| | |
Sbjct 791673 CGTGACAAGGTGGAAGAGCCATATCGTTCATATCGGCGGGATTCCATGCTGACATGATTA 791732
Query 97310 TTCTTCTATCGGTTGG-GTTTGTGTG---TATGGTATTAATTATCTGCTTTAATTGATCA 97365
||| ||| || ||| || | || | | |||| | || |||| | ||||||
Sbjct 791733 TTCGTCTGTCATATGGTGTCTCCTTGATTTTTCGTATCACTT--CTGCC--AGTTGATCT 791788
Query 97366 ACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCAT 97425
|| |||| ||| |||| | | | | ||||| || |||||||| ||||||
Sbjct 791789 ACTCCTTTACCAGAGTAATCAGTATCGCAATCCTCATATTTGGCGCCAAAATGTCTCCAT 791848
Query 97426 TGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCT 97485
||||| ||||| || |||||||| ||||| || ||| | | || |||| ||
Sbjct 791849 TGGAAACCATACACGGGTCCAAGATCTCCCTCACGTCTGTGTTCTAGTCCTCGCTTGTCC 791908
Query 97486 AAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTTG 97545
||| | | | |||||| |||||||||| || || || | | |||| |||
Sbjct 791909 AAAAACTCTCGACTTCCATTGCCATCCCAAATATGAACGCCTCTGTCAGAAAGCAATTTC 791968
Query 97546 CTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACT 97605
|||||||| ||| ||| |||||| || | |||||||| |||||| | || |||||
Sbjct 791969 GAATCAGTAGACCCTTTGACAAACCATAATAGTTCTTCCAAGACACCTTTGAAATATACT 792028
Query 97606 CTCTTAGTTGTTAAGAGAGGAAA 97628
| ||||| ||||| || || ||
Sbjct 792029 CGTTTAGTAGTTAAAAGTGGCAA 792051
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346783983094280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |