Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq3 163 2e-35 >seq3 Length=2773601 Score = 163 bits (180), Expect = 2e-35 Identities = 449/683 (66%), Gaps = 24/683 (4%) Strand=Plus/Plus Query 96964 TTAAAATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGCCTG--G 97021 || |||||||||||| | || | ||| ||||| || || ||||| | ||| | Sbjct 791375 TTGAAATCATCAATATCGGTGATATCTCTTGCAAAGCGCAGAGTAGGGAA--GTCTGTAG 791432 Query 97022 GAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTC 97081 | |||| || || ||| || |||| || |||| || | | || | |||||||| | Sbjct 791433 GGGTTCTCGCAATTTGCACTTTGAGCGCTTCAACATGGTCTGCGTAGACATGAGCATCGC 791492 Query 97082 CTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTA 97141 | | ||||||||||| || ||| ||| || || | |||||||| |||| Sbjct 791493 CCATTGTGTGAATAAAATCACCACATTCTATTCCACAAACCTTAGCGATCATCTTCGTTA 791552 Query 97142 ATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGAT 97201 | | || ||| ||||| ||||| ||||| || | ||||||||| |||||||| Sbjct 791553 ACAAAGCATAAGAGGCAATATTAAATGGCACTCCCAAGCCCATATCACAACTTCTTTGAT 791612 Query 97202 ATAACTGACAGGAAAGCTTT------CCATCACACA------CATAAAACTGACTCAATA 97249 |||||||||| ||||||| | |||| || | ||||||||||| |||| Sbjct 791613 ATAACTGACAAGAAAGCTCTGGCTTACCATTACGGAAGCTTACATAAAACTGAGAAAATA 791672 Query 97250 CATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACA 97309 | ||||| || || | ||||| | | ||| | |||||| || |||| | | Sbjct 791673 CGTGACAAGGTGGAAGAGCCATATCGTTCATATCGGCGGGATTCCATGCTGACATGATTA 791732 Query 97310 TTCTTCTATCGGTTGG-GTTTGTGTG---TATGGTATTAATTATCTGCTTTAATTGATCA 97365 ||| ||| || ||| || | || | | |||| | || |||| | |||||| Sbjct 791733 TTCGTCTGTCATATGGTGTCTCCTTGATTTTTCGTATCACTT--CTGCC--AGTTGATCT 791788 Query 97366 ACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCAT 97425 || |||| ||| |||| | | | | ||||| || |||||||| |||||| Sbjct 791789 ACTCCTTTACCAGAGTAATCAGTATCGCAATCCTCATATTTGGCGCCAAAATGTCTCCAT 791848 Query 97426 TGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCT 97485 ||||| ||||| || |||||||| ||||| || ||| | | || |||| || Sbjct 791849 TGGAAACCATACACGGGTCCAAGATCTCCCTCACGTCTGTGTTCTAGTCCTCGCTTGTCC 791908 Query 97486 AAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTTG 97545 ||| | | | |||||| |||||||||| || || || | | |||| ||| Sbjct 791909 AAAAACTCTCGACTTCCATTGCCATCCCAAATATGAACGCCTCTGTCAGAAAGCAATTTC 791968 Query 97546 CTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACT 97605 |||||||| ||| ||| |||||| || | |||||||| |||||| | || ||||| Sbjct 791969 GAATCAGTAGACCCTTTGACAAACCATAATAGTTCTTCCAAGACACCTTTGAAATATACT 792028 Query 97606 CTCTTAGTTGTTAAGAGAGGAAA 97628 | ||||| ||||| || || || Sbjct 792029 CGTTTAGTAGTTAAAAGTGGCAA 792051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783983094280