Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq3 152 8e-32
>seq3
Length=2773601
Score = 152 bits (168), Expect = 8e-32
Identities = 174/231 (75%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || ||||||| || || || || || || ||| | || |||| | |
Sbjct 154121 ATGCAAATCTTCGTAAAGACCCTCACTGGTAAGACCATTACTCTTGAAGTTGAGTCCTCT 154180
Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||||| ||| |||| |||| || ||||||||||| || |||||||| || || || ||
Sbjct 154181 GATACTATTGATAATGTTAAGACC-AAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 154239
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||||| ||||||||||| || || |||||||| ||| | |||| || ||||| ||
Sbjct 154240 ACAAAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGATTACAA 154299
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|||||||| ||||| ||| | || |||||| | ||| | || ||||||||
Sbjct 154300 CATTCAAAAGGAATCCACTCTCCACTTGGTTCTTCGTCTTCGTGGTGGTAT 154350
Score = 150 bits (166), Expect = 3e-31
Identities = 183/248 (74%), Gaps = 1/248 (0%)
Strand=Plus/Plus
Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595
||||||||||| || ||||||| || || || || || || ||| | ||| |||| |
Sbjct 153890 ACAATGCAAATCTTCGTAAAGACCCTCACTGGTAAGACCATCACTCTTGAGGTTGAGTCC 153949
Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655
|||||| || ||| | || || |||||||| || |||||||| || || ||
Sbjct 153950 TCTGATACTATCGACAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCTCCAGAC 154009
Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715
|||||||| ||||||||||| || || |||||||| ||| | |||| || |||||
Sbjct 154010 CAACAAAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGATTAC 154069
Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAA 124774
||||||||||| ||||| ||| | || |||||| | ||| | || |||||||| |||
Sbjct 154070 AATATTCAAAAGGAATCTACTCTTCACTTGGTTCTTCGTCTTCGTGGTGGTATGCAAATC 154129
Query 124775 TTCATAAA 124782
||| ||||
Sbjct 154130 TTCGTAAA 154137
Score = 93.3 bits (102), Expect = 6e-14
Identities = 305/471 (65%), Gaps = 11/471 (2%)
Strand=Plus/Plus
Query 205453 GCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACCTAAACCCATA 205512
|| ||||| | || || ||| |||| |||| ||||||||| || || || ||||||
Sbjct 791537 GCGATCATCTTCGTTAACAAAGCATAAGAGGCAATATTAAATGGCACTCCCAAGCCCATA 791596
Query 205513 TCAGCTGATCTTTGATACATTTGACATGTAAGATAT---TTATTATTAA------TTACA 205563
||| ||||||||| | ||||| | ||| | | ||| |||| |||||
Sbjct 791597 TCACAACTTCTTTGATATAACTGACAAGAAAGCTCTGGCTTACCATTACGGAAGCTTACA 791656
Query 205564 TGAAATTGTACAAAACAA-TGACAAGGTGGTATAACCATATTTTCAACATCTATAGGATT 205622
| ||| || | |||| | ||||||||||| | | |||||| | | ||| |||||
Sbjct 791657 TAAAACTG-AGAAAATACGTGACAAGGTGGAAGAGCCATATCGTTCATATCGGCGGGATT 791715
Query 205623 CCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatAATATG 205682
||| |||| | ||||| ||| | ||| | | || ||||| ||| | |
Sbjct 791716 CCATGCTGACATGATTATTCGTCTGTCATATGGTGTCTCCTTGATTTTTCGTATCACTTC 791775
Query 205683 TGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTAGCACC 205742
|| | |||||| | ||||| | | |||| ||||| ||| |||||| || ||
Sbjct 791776 TGCCAGTTGATCTACTCCTTTACCAGAGTAATCAGTATCGCAATCCTCATATTTGGCGCC 791835
Query 205743 AAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTATCATTAAA 205802
|||||| | |||||| |||||||| || || || | ||| || || ||| | | |
Sbjct 791836 AAAATGTCTCCATTGGAAACCATACACGGGTCCAAGATCTCCCTCACGTCTGTGTTCTAG 791895
Query 205803 ACCACGtttttttatatattttaatgatccattttcatcccaaatatggattcctttatt 205862
|| || || | | | | | | |||||| ||||||||||||| | ||| | |
Sbjct 791896 TCCTCGCTTGTCCAAAAACTCTCGACTTCCATTGCCATCCCAAATATGAACGCCTCTGTC 791955
Query 205863 ttttaGAATATTTGTATTAGTTGATCCAGATATAAACCATAATAATTCTTC 205913
|| | || | || ||| || || | ||||||||||| ||||||
Sbjct 791956 AGAAAGCAATTTCGAATCAGTAGACCCTTTGACAAACCATAATAGTTCTTC 792006
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755455962227200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |