Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq3 89.7 3e-13
>seq3
Length=2773601
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || | || |||| ||| | || || ||||| ||||||||||||||
Sbjct 155259 CCGCCACGAAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 155200
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | |||||| || || || ||||| | || ||||| |||
Sbjct 155199 AGAGTACGACCGTCTTCGAGCTGCTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGGA 155140
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | || | || | || |||||
Sbjct 155139 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTATCAATGGTGTCCGAAGACTCGACC 155080
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||| || || || ||||| || || || ||||| |||||
Sbjct 155079 TCGAGCGTGATAGTCTTACCAGTGAGGGTCTTGACGAAGATTTGCAT 155033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071984250240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |