Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq3 134 1e-26 >seq3 Length=2773601 Score = 134 bits (148), Expect = 1e-26 Identities = 495/767 (65%), Gaps = 25/767 (3%) Strand=Plus/Minus Query 20053 TTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAA 20112 |||||||| ||||| |||| || ||||| || | ||||| ||||||||||| | ||| Sbjct 792042 TTAACTACTAAACGAGTATATTTCAAAGGTGTCTTGGAAGAACTATTATGGTTTGTCAAA 791983 Query 20113 GGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGG-AGCGCACATGG 20171 || || || |||| | |||| || | ||| ||| | |||||| | ||| |||| Sbjct 791982 GGGTCTACTGATTCGAAATTGCTTTCTGACAGAGGCGTTCATATTTGGGATGGCA-ATGG 791924 Query 20172 ATCTAAGCAATTTTTACACA-GCAATGGATTTGACAACCGTCAAGAGGGGGATTTGGGTC 20230 | | | ||||| ||| || | ||| | || || | | ||||| ||| | || | Sbjct 791923 AAGTCGAGAGTTTTTGGACAAGCGA-GGACTAGAACACAGACGTGAGGGAGATCTTGGAC 791865 Query 20231 CTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAACACAAATT 20290 | |||||||| || ||||||||||||||||| || |||||| || | || ||| Sbjct 791864 CCGTGTATGGTTTCCAATGGAGACATTTTGGCGCCAAATATGAGGATTGCGATACTGATT 791805 Query 20291 ATTTTGGACAAGGAGTAGATCAA-TTACA-AAATGTTATTAATTTAATTAAAACGAACCC 20348 | | ||| |||||||||||||| | || || || || || ||| || || || Sbjct 791804 ACTCTGGTAAAGGAGTAGATCAACTGGCAGAAGTGATACGAA--AAATCAAGGAGACACC 791747 Query 20349 AAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTT 20408 | | |||||| |||| || | | || ||||| | ||| || |||||| | Sbjct 791746 ATATGACAGACGAATAATCATGTCAGCATGGAATCCCGCCGATATGAACGATATGGCTCT 791687 Query 20409 GCCTCCATGTCATATGCTATGCCAATTTTACGT------------TGCTAATAATGAATT 20456 || || ||||| | | | || ||||| || || ||| || | Sbjct 791686 TCCACCTTGTCACGTATTTTCTCAGTTTTATGTAAGCTTCCGTAATGGTAAGCCAGAGCT 791627 Query 20457 GTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGC 20516 || ||||| | |||||| || ||||||||| |||| || || || |||||||| Sbjct 791626 TTCTTGTCAGTTATATCAAAGAAGTTGTGATATGGGCTTGGGAGTGCCATTTAATATTGC 791567 Query 20517 AAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTT 20576 |||||| || | ||| | ||||| || | ||| | || || ||||| || Sbjct 791566 CTCTTATGCTTTGTTAACGAAGATGATCGCTAAGGTTTGTGGAATAGAATGTGGTGATTT 791507 Query 20577 AGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACA 20636 | ||||| || || || || ||| | ||| | ||| | ||| | | ||| | || Sbjct 791506 TATTCACACAATGGGCGATGCTCATGTCTACGCAGACCATGTTGAAGCGCTCAAAGTGCA 791447 Query 20637 GTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAGATAT 20696 | | || || | | | ||||| ||||| ||| || | || | | | ||||| Sbjct 791446 AATTGCGAGAACCCCTACAGACTTCCCTACTCTGCGCTTTGCAAGAGATATCACCGATAT 791387 Query 20697 TAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATTCAATTCC 20756 | | ||||| || ||| |||||||| | ||||| ||||| ||||| | ||| Sbjct 791386 TGATGATTTCAAGTATGAGGATTTTGTTGTCGAAGGATATAAACCCCAATCTAAGATTGA 791327 Query 20757 AATGGAAATGTCTGTTTAAT-ATATATT----CCAATAAACTAAATT 20798 ||| ||||||| || |||| ||||| | || |||| |||||| Sbjct 791326 GATGAAAATGTCGGTGTAATAATATAATATGACCTTTAAAATAAATT 791280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183980539780