Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq3 134 1e-26
>seq3
Length=2773601
Score = 134 bits (148), Expect = 1e-26
Identities = 495/767 (65%), Gaps = 25/767 (3%)
Strand=Plus/Minus
Query 20053 TTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAA 20112
|||||||| ||||| |||| || ||||| || | ||||| ||||||||||| | |||
Sbjct 792042 TTAACTACTAAACGAGTATATTTCAAAGGTGTCTTGGAAGAACTATTATGGTTTGTCAAA 791983
Query 20113 GGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGG-AGCGCACATGG 20171
|| || || |||| | |||| || | ||| ||| | |||||| | ||| ||||
Sbjct 791982 GGGTCTACTGATTCGAAATTGCTTTCTGACAGAGGCGTTCATATTTGGGATGGCA-ATGG 791924
Query 20172 ATCTAAGCAATTTTTACACA-GCAATGGATTTGACAACCGTCAAGAGGGGGATTTGGGTC 20230
| | | ||||| ||| || | ||| | || || | | ||||| ||| | || |
Sbjct 791923 AAGTCGAGAGTTTTTGGACAAGCGA-GGACTAGAACACAGACGTGAGGGAGATCTTGGAC 791865
Query 20231 CTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAACACAAATT 20290
| |||||||| || ||||||||||||||||| || |||||| || | || |||
Sbjct 791864 CCGTGTATGGTTTCCAATGGAGACATTTTGGCGCCAAATATGAGGATTGCGATACTGATT 791805
Query 20291 ATTTTGGACAAGGAGTAGATCAA-TTACA-AAATGTTATTAATTTAATTAAAACGAACCC 20348
| | ||| |||||||||||||| | || || || || || ||| || || ||
Sbjct 791804 ACTCTGGTAAAGGAGTAGATCAACTGGCAGAAGTGATACGAA--AAATCAAGGAGACACC 791747
Query 20349 AAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTT 20408
| | |||||| |||| || | | || ||||| | ||| || |||||| |
Sbjct 791746 ATATGACAGACGAATAATCATGTCAGCATGGAATCCCGCCGATATGAACGATATGGCTCT 791687
Query 20409 GCCTCCATGTCATATGCTATGCCAATTTTACGT------------TGCTAATAATGAATT 20456
|| || ||||| | | | || ||||| || || ||| || |
Sbjct 791686 TCCACCTTGTCACGTATTTTCTCAGTTTTATGTAAGCTTCCGTAATGGTAAGCCAGAGCT 791627
Query 20457 GTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGC 20516
|| ||||| | |||||| || ||||||||| |||| || || || ||||||||
Sbjct 791626 TTCTTGTCAGTTATATCAAAGAAGTTGTGATATGGGCTTGGGAGTGCCATTTAATATTGC 791567
Query 20517 AAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTT 20576
|||||| || | ||| | ||||| || | ||| | || || ||||| ||
Sbjct 791566 CTCTTATGCTTTGTTAACGAAGATGATCGCTAAGGTTTGTGGAATAGAATGTGGTGATTT 791507
Query 20577 AGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACA 20636
| ||||| || || || || ||| | ||| | ||| | ||| | | ||| | ||
Sbjct 791506 TATTCACACAATGGGCGATGCTCATGTCTACGCAGACCATGTTGAAGCGCTCAAAGTGCA 791447
Query 20637 GTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAGATAT 20696
| | || || | | | ||||| ||||| ||| || | || | | | |||||
Sbjct 791446 AATTGCGAGAACCCCTACAGACTTCCCTACTCTGCGCTTTGCAAGAGATATCACCGATAT 791387
Query 20697 TAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATTCAATTCC 20756
| | ||||| || ||| |||||||| | ||||| ||||| ||||| | |||
Sbjct 791386 TGATGATTTCAAGTATGAGGATTTTGTTGTCGAAGGATATAAACCCCAATCTAAGATTGA 791327
Query 20757 AATGGAAATGTCTGTTTAAT-ATATATT----CCAATAAACTAAATT 20798
||| ||||||| || |||| ||||| | || |||| ||||||
Sbjct 791326 GATGAAAATGTCGGTGTAATAATATAATATGACCTTTAAAATAAATT 791280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399183980539780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |