Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq3 82.4 6e-11 >seq3 Length=2773601 Score = 82.4 bits (90), Expect = 6e-11 Identities = 152/223 (68%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | ||||| |||||||||||||||||||| | || ||| || | || || Sbjct 154101 ACCAAGTGAAGAGTAGATTCCTTTTGAATATTGTAATCAGACAAGGTTCTGCCATCTTCT 154042 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 | || ||||| ||| |||||||||| || || || || | || || ||||| | Sbjct 154041 AATTGCTTACCAGCAAAAATAAGTCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGA 153982 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || || || || | | ||| |||||| | ||| || | || ||||| ||| Sbjct 153981 ATCTTGGTCTTGACATTGTCGATAGTATCAGAGGACTCAACCTCAAGAGTGATGGTCTTA 153922 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCATTTTAAATCTCTTAT 19055 || || | || || || || ||||||||| | || | |||| Sbjct 153921 CCAGTGAGGGTCTTTACGAAGATTTGCATTGTGAAGTTGTTAT 153879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572779789576