Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq3 179 6e-41
>seq3
Length=2773601
Score = 179 bits (198), Expect = 6e-41
Identities = 202/268 (75%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| |||||| || ||||||||||| || |||||||| |||||
Sbjct 1597191 GCCAAGCGTCACAGAAAGAT-TCTTCGTGACAACATCCAAGGTATTACCAAGCCTGCTAT 1597133
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|||||||||||| ||||||||||| ||||||||| |||| | | |||| |||||||
Sbjct 1597132 CCGTCGTCTGGCCCGTCGTGGTGGTGTCAAGCGTATCTCAGCTCTTATCTACGAAGAGAC 1597073
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| || | ||| |||||| || | || |||| |||||| || |||||||||
Sbjct 1597072 CCGTGGAGTCCTCAAGTCATTCCTCGAGTCGGTCATCCGTGATGCCGTCACCTATACCGA 1597013
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | ||||| |||||||| | || ||||||| || | || | |||||
Sbjct 1597012 ACACGCCAAGAGAAAGACCGTCACCTCTCTCGACGTCGTCTACGCTCTCAAGAGACAAGG 1596953
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||||| | || ||||| || |||||
Sbjct 1596952 CCGTACTTTGTACGGTTTCGGTGGTTAA 1596925
Score = 174 bits (192), Expect = 2e-39
Identities = 201/268 (75%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| |||||| || ||||| ||||| ||||||||||| || ||
Sbjct 103982 GCCAAGCGTCACAGAAAGAT-TCTTCGTGACAACATTCAAGGTATCACCAAGCCTGCCAT 104040
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|||||||||||| | | ||||| ||||||||| |||||| | |||| |||||||
Sbjct 104041 CCGTCGTCTGGCAAGAAGAGGTGGTGTCAAGCGTATCTCTGCCCTCATCTACGAAGAGAC 104100
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| | ||| |||||| | |||| |||| |||||| || |||||| ||
Sbjct 104101 CCGTGGAGTTCTCAAGTCGTTCCTCGAATCCGTCATCCGTGATGCAGTCACCTATACTGA 104160
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| |||||||| | ||| ||||||| || | || | |||||
Sbjct 104161 GCACGCCAAGAGAAAGACCGTCACCTCTCTCGATGTCGTCTACGCCCTCAAGAGACAAGG 104220
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||||| |||| ||||| || |||||
Sbjct 104221 CCGTACCCTTTACGGTTTCGGTGGTTAA 104248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075196342772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |