Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq3 96.9 3e-15
>seq3
Length=2773601
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | ||||| || || || |||||||| | |||||| ||||| | || ||
Sbjct 154349 ATGCAAATCTTTGTCAAGACCTTGACTGGAAAGACCATCACCCTCGAAGTCGAGTCCTCT 154408
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| || || || | || || ||||| ||||| || || || ||||| || |||
Sbjct 154409 GATACTATTGATAATGTTAAGACTAAGATCCAAGACAAGGAGGGTATTCCTCCAGACCAA 154468
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|||||||| || | | || || |||||||| |||| | | | | |||||| |||
Sbjct 154469 CAAAGACTTATCTTTGCTGGTAAGCAACTCGAGGATGGTCGTACTCTTTCCGACTACAAC 154528
Query 26949 ATTCAAAAAGAATCTACT 26966
|||||||| |||||||||
Sbjct 154529 ATTCAAAAGGAATCTACT 154546
Score = 96.9 bits (106), Expect = 3e-15
Identities = 134/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852
||||| || | |||||| |||| | || || ||||||||| || | |||||
Sbjct 1977496 ACTGGTAAGACCATCACCCTCGAGGTCGAGTCTTCCGACACCATTGACAACGTCAAGACC 1977555
Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912
||||| ||||| || || || || || ||||||||| | || || | || ||| ||
Sbjct 1977556 AAGATCCAAGACAAGGAGGGAATTCCCCCAGATCAACAACGTCTTATCTTCGCCGGTAAG 1977615
Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972
|||||||| |||| |||| | | ||||| ||||||||||| || || ||| ||||
Sbjct 1977616 CAACTCGAGGATGGCAGAACCCTTTCTGACTACAACATTCAAAAGGAGTCGACTCTCCAC 1977675
Query 26973 CTGGTCCT 26980
|| |||||
Sbjct 1977676 CTTGTCCT 1977683
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
|| ||||||| | || ||||| || | ||||| || | ||||| | || | || ||
Sbjct 153889 CACAATGCAAATCTTCGTAAAGACCCTCACTGGTAAGACCATCACTCTTGAGGTTGAGTC 153948
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
|| || ||||| | ||||| |||||| ||||| ||||| || ||||| ||
Sbjct 153949 CTCTGATACTATCGACAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCTCCAGA 154008
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
||||||||||| |||| | || || ||| | ||||||| |||| | | || ||
Sbjct 154009 CCAACAAAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGATTA 154068
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|| |||||||| ||||||||| | || |||| ||
Sbjct 154069 CAATATTCAAAAGGAATCTACTCTTCACTTGGTTCT 154104
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || || ||||| || | || || ||||| | || ||
Sbjct 154805 ATGCAAATCTTCGTCAAGACTTTGACTGGTAAGACTATTACTCTCGAAGTCGAGTCCTCT 154864
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| || ||||| | ||||| |||||| ||||| ||||| || ||||| || |||
Sbjct 154865 GATACTATCGACAACGTCAAGACTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 154924
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | | |||| || || || ||| | ||||| | | | || ||||||||||
Sbjct 154925 CAGCGTTTGATTTTCGCTGGTAAGCAATTGGAAGACGGCCGTACTCTCTCCGACTATAAC 154984
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|| ||||| ||||||||| |||| |||||||
Sbjct 154985 ATCCAAAAGGAATCTACTCTCCACTTGGTCCT 155016
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || || ||||| || | || || ||||| | |||||
Sbjct 154577 ATGCAAATCTTCGTCAAGACTTTGACTGGTAAGACTATTACTCTCGAAGTTGAATCCTCT 154636
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| || || || | ||||| |||||| ||||| || || || ||||| || |||
Sbjct 154637 GATACTATTGATAACGTCAAGACCAAGATTCAAGACAAGGAGGGTATTCCTCCAGACCAA 154696
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | | |||| || || || |||||||| |||| | | || |||||| |||
Sbjct 154697 CAGCGTTTGATTTTCGCTGGTAAGCAACTCGAGGATGGCCGTACTCTCTCCGACTACAAC 154756
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|||||||| ||||| ||| |||| | |||||
Sbjct 154757 ATTCAAAAGGAATCCACTCTCCACTTAGTCCT 154788
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || ||||| || | ||||| || | || || | ||| | || ||
Sbjct 154121 ATGCAAATCTTCGTAAAGACCCTCACTGGTAAGACCATTACTCTTGAAGTTGAGTCCTCT 154180
Query 26829 GACACCATCGAGCAAGTCAA-ACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887
|| || || || | || || || ||| ||| ||||| ||||| || ||||| || ||
Sbjct 154181 GATACTATTGATAATGTTAAGACCAAA-ATTCAAGACAAGGAAGGTATTCCTCCAGACCA 154239
Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947
||||||||| |||| | || || ||| | ||||||| |||| | | || || ||
Sbjct 154240 ACAAAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGATTACAA 154299
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||||||| ||||| ||| |||| |||| ||
Sbjct 154300 CATTCAAAAGGAATCCACTCTCCACTTGGTTCT 154332
Score = 82.4 bits (90), Expect = 7e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || | ||||| || | ||||| |||| | || ||
Sbjct 155033 ATGCAAATCTTCGTCAAGACCCTCACTGGTAAGACTATCACGCTCGAGGTCGAGTCTTCG 155092
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | ||||| ||||| ||||| || || || || || || |||
Sbjct 155093 GACACCATTGATAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAA 155152
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||||||||||| | | ||| || || |||||||| | | | | || |||||| |||
Sbjct 155153 CAAAGACTCATCTTTGCCGGTAAGCAGCTCGAAGACGGTCGTACTCTCTCCGACTACAAC 155212
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998
|| || || || || || |||| ||||||| | ||| | || || ||
Sbjct 155213 ATCCAGAAGGAGTCGACCCTCCACTTGGTCCTCCGTCTTCGTGGCGGTAA 155262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478662376066880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |