Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq2 242 1e-58
>seq2
Length=4956242
Score = 242 bits (268), Expect = 1e-58
Identities = 1150/1797 (64%), Gaps = 50/1797 (3%)
Strand=Plus/Plus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGA 363449
||||| | ||||| |||| | ||| ||| | ||| || |||||| | || | ||
Sbjct 3632605 TTCGGTTTCAAGACTTTGGAAAGATCGTACTTG-CTCAAGATTAATGGTAAAATCGCCGA 3632663
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509
| || || || ||| | ||| | || ||| ||||||| ||| | | ||| |
Sbjct 3632664 GAGACCCCAACACATGATCATGAGAGTAGCTGTTGGTATTCATGGTTCTGATATCACCAA 3632723
Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTGCTCGT--GTATTC-ACGCACGCCACGCCAAC 363566
|| ||||||||||| || || | | || ||| ||||| || || ||| | || ||
Sbjct 3632724 GGCCATTGAAACATACAA-CTAC-ATGT-CTCAAAAGTATTTTACACATGCCTCCCCCAC 3632780
Query 363567 AATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626
||||||||||||| |||| || || || ||||| |||||||| | | || |||||
Sbjct 3632781 TCTGTACAATGCTGGTACTCCCAAGCCTCAAATGTCCTCTTGCTTCTTGGTTAACATGAA 3632840
Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686
||||||||| || || || || | || || | |||| |||||| | ||||| |||
Sbjct 3632841 GGACGATTCTATAGATGGCATTTACGATACTTTGAAGACTTGTGCCTTGATTTCAAAGTC 3632900
Query 363687 TGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCG 363745
||| || || |||||| | | || ||| | ||||| || | | |||||| |
Sbjct 3632901 TGCTGGTGGTATTGGTTTGAGTGTTCATAATATCCGTGCTACTGG-CTCCTACATTGCTG 3632959
Query 363746 GCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGA 363805
| || || ||| || || | ||||||||| | | || || | |||||||| |
Sbjct 3632960 GAACTAACGGTACCTCAAACGGTATTGTTCCCATGTTGAGAGTTTTCAATAATACTGCTA 3633019
Query 363806 GGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTC 363865
| || || || |||||||| ||||| ||| || ||||| ||||| | ||||||
Sbjct 3633020 GATATGTTGATCAGGGTGGTAATAAGCGACCAGGTGCTTTTGCCATGTACTTGGAGCCTT 3633079
Query 363866 ATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAAGAGGAATTG 363924
|||| ||| ||||||| || ||||||| || || || ||||| || || ||| |
Sbjct 3633080 GGCATGATGATGTTTTTGAATTCATTGAGCTGCGAAAGAATCACGGTAAG-GAAGAAGTC 3633138
Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984
||||| | ||| |||||| || || ||| || ||||| || |||||| | || ||
Sbjct 3633139 CGTGCCAGAGATTTGTTCTTGGCTCTATGGATTCCTGACTTGTTCATGAAGAGAGTCAAG 3633198
Query 363985 GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044
|| || ||||| | | | || || | || ||||| || | ||||| |
Sbjct 3633199 GCTAACGAGGATTGGACTTTGATGTGTCCCAATGAGTGTCCTGGCTTGGATGATGTCTAT 3633258
Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAA-AGGCTCGTAAGAC 364103
|||||||| | |||||||| || || ||||| || ||| || | |||| | | ||
Sbjct 3633259 GGTGACGAGTTCGTTGCTCTTTATGAGAAGTACGAGAAGGAAGGTAGAGGCA-GAAGAAC 3633317
Query 364104 AATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACC 364163
|| || || ||||| |||| ||| || | || | || | |||||| || | ||
Sbjct 3633318 CATCAAGGCCCAAAAGCTGTGGTATGCTATTCTCGAAGCTCAAACTGAGACTGGTAACCC 3633377
Query 364164 CTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAAT 364223
| ||| | || || ||| | || || ||||| ||||| || || | ||||| ||
Sbjct 3633378 ATTCATGCTTTATAAGGATGCTTGTAATAGCAAGAGTAACCAACAAAACTTGGGTACTAT 3633437
Query 364224 TCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283
|| |||| | || || ||| |||| ||| | |||| || || ||||||
Sbjct 3633438 CAAGTCCTCCAACTTGTGCTGTGAAATTGTTGAGTACTCTTCTCCTGAAGAAGTTGCCGT 3633497
Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAA---GATG--GTACTTTTG-- 364336
||||| | || ||| | | || || || || || || |||| | | ||||
Sbjct 3633498 CTGTAATTTGGCATCGTTGTCTCTACCTGCTTTCGTTGAAAGTGATGAGGAAGGTTTGTG 3633557
Query 364337 -----ACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGT 364391
|| | | ||| | || || || | || ||| | || || || | | |
Sbjct 3633558 GTATAACTTTAACAAACTTCACGAGGTTGCCAAGGTTGTCACTAGAAA-CTTGA-ATGTT 3633615
Query 364392 --TATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGC 364449
||| |||| || | ||| || | ||||| || | ||| | ||||| |
Sbjct 3633616 ATTATTGACAGAAACTTTTACCCTGTCAAGGAAGCTGAAAGAAGCAATTTCCGTCACAGA 3633675
Query 364450 CCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTT 364509
|| |||| ||||||| | || || | || || | |||||| ||| || ||||
Sbjct 3633676 CCCATTGCTCTTGGTATTCAAGGTTTGGCCGATGCCTTTATGGCTCTCCGTTTGCCATTC 3633735
Query 364510 GATTCGCCTGACGCTCGTGTTCTAAATAAGG---AGATCTTTGAAACAATGTATTTTGCC 364566
|| || ||||| || | | | | || | | || ||| || || ||| |||
Sbjct 3633736 GACTCCCCTGAGGC-CAAG--CAATTGAACGTTCAAATTGCTGAGACCATCTATCATGCT 3633792
Query 364567 GCAAT-GACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGG 364625
|| | || | ||||| ||| | || || | ||| || ||||| | ||
Sbjct 3633793 GCTGTTGAAT-CTTCGGTTGAACTCGCCGAATTGTACGGACCCTATGAGACTTACCAAGG 3633851
Query 364626 GTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCG 364685
|| ||| || |||| || || |||||| | ||| || |||| || ||| |
Sbjct 3633852 TTCTCCTGCCTCAAAGGGTCTTTTGCAATTTGATTTGTGGGATATCACTCCCACTGATCT 3633911
Query 364686 ATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCT--- 364742
||| |||||| | | || || | ||||||||| | ||||||||
Sbjct 3633912 CTGGGACTGGGCTGCTCTCAAGAAGAAGATGGCTAAGCATGGTCTGAGAAACTCCCTTCT 3633971
Query 364743 CGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTT 364802
|||| || || ||||| || || || || |||| || || || |||||||| || ||
Sbjct 3633972 CGTT---GCTCCTATGCCTACTGCCTCAACATCACAAATTCTTGGTAACAACGAATGTTT 3634028
Query 364803 CGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGT 364862
|||||| | ||| ||| | || || || | |||||| |||| ||||| | | ||
Sbjct 3634029 CGAACCTTACACATCCAACATCTACTCTCGTAGAGTTCTTGCCGGTGAATTCCAAATTGT 3634088
Query 364863 TAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAA 364922
|||| | | | | ||||| ||| ||| || |||||||| || | |||||||||
Sbjct 3634089 TAATCAATGGTTGTTGAAGGACCTTGTCGATTTGGGACTGTGGGGAGAGAACATGAAGAA 3634148
Query 364923 CTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAA 364982
|| || ||| ||||||||| | ||||| ||||| | || || ||| | ||
Sbjct 3634149 TAGAATTATTGCCAACAATGGTTCTATTCAGAATATTCCTAACATCCCTGAGGATATCAA 3634208
Query 364983 GCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGA 365042
| | | || || || || ||||| |||| | || ||||||||||||| || ||
Sbjct 3634209 GGCATTGTATAAGACTGTTTGGGAGCTTTCTCAGAAGACAATCATTGATATGGCTGCTGA 3634268
Query 365043 TCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCA---GCCAAC 365099
||| | ||| |||||| ||| || || || || ||| | | ||| ||| || ||
Sbjct 3634269 TCGTGCTGCCTTTATCGATCAAAGTCAATCTTTGAACATTTACAT---TCAAGCTCCTAC 3634325
Query 365100 CTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| ||| | || |||||||||||||| ||| || ||||||||||||||
Sbjct 3634326 TATGGGCAAATTGACTAGTATGCATTTCTACGGCTGGCAAAAGGGTCTTAAGACAGG 3634382
Score = 131 bits (144), Expect = 4e-25
Identities = 499/766 (65%), Gaps = 28/766 (4%)
Strand=Plus/Plus
Query 22216 CTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGT-GACTAATTTTGC 22274
|| |||||||||||| | |||| ||||| || ||||| | || || ||| | |
Sbjct 3219589 CTTGCATTCTTTGCTGCTTCAGATGGTATCGTCAACGAGAACTTGGTTGAAAGATTCT-C 3219647
Query 22275 ATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAA 22334
|||| ||||| || ||||| | ||||| || ||| | ||||| ||||| || ||
Sbjct 3219648 TGGTGAAGTTCAAATTCCCGAGGCAAAGTGTTTTTACGGTTTCCAAATTATGATGGAGAA 3219707
Query 22335 TGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTA-----GAAGATAAAGAC 22389
| || || || || || || | | || | |||| || || | ||| ||
Sbjct 3219708 CATCCATGCAGAGACCTACTCATTACT--TATTGACACTTATATCAAGGATGCTAAGGAG 3219765
Query 22390 GAACAACGAAACTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGAT 22449
| ||| || |||| || ||| || |||| || |||||||| ||||| ||
Sbjct 3219766 GCT-AACTTT--TTGTTCCATGCTATTGACAATATTCCATGTATTAAGAAGAAGGCTGAC 3219822
Query 22450 TGGGCGCTGAAATGGATGAACAATGAAC-GTTCA--TTCGCGGAACGTCTTATTGCATTT 22506
||||| || |||||| |||| | || || || || || ||||| |||| |||
Sbjct 3219823 TGGGCTCTCCGATGGATTGCTGATGATCAGTCCACTTTTGCTGAGCGTCTCGTTGCCTTT 3219882
Query 22507 GCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaa 22566
|||| ||||| || || ||||| |||||| ||||| ||||| ||| | || ||
Sbjct 3219883 GCTGCCGTTGAGGGTATCTTCTTCTCTGGATCATTTGCCAGTATCTTCTGGTTGAAGAAG 3219942
Query 22567 CGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTT 22626
|||| | | ||||| ||||| ||||| ||||| || || || || ||||| || |
Sbjct 3219943 CGTGGACTCATGCCTGGTCTGACGTTCTCAAACGAATTGATCTCGCGTGATGAAGGCATG 3220002
Query 22627 CATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATATGAA 22686
|| ||||||||||| ||| |||| | |||| || | || | ||| | || |||
Sbjct 3220003 CACACCGATTTTGCTTGTTTGCT-TTTCGG--CCA---CCTT-GTCAACAGACCTAAGAA 3220055
Query 22687 -ACTGTACTTG---ATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGC-G 22741
|||| ||| | ||||| || | || ||| ||||| | || || | |
Sbjct 3220056 GTCTGTTATTGAAAAGATTATCACTGAAGCCGTTATTATTGAA-AAGGAGTTCTTGACTG 3220114
Query 22742 AGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAAT 22801
| || || ||| ||||| | || || |||||| | ||| | ||| ||| | |
Sbjct 3220115 ATGCTTTGCCATGTAGTCTTTTGGGAATGAATGCCAAGCTTATGTGCCAATACATTGAGT 3220174
Query 22802 TTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATC 22861
||||||| || | ||||| |||| || ||| | ||| ||||| | || |
Sbjct 3220175 TTGTTGCTGACAGATTATTACTTTCCCTTGGTAACAGTAAGGTATATAATGCTACCAACC 3220234
Query 22862 CATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAG 22921
| ||||| | |||||| || ||| | || |||||||| ||||| || || ||||
Sbjct 3220235 CCTTTGATTTCATGGAAAACATCTCATTGTCTGGCAAGACCAACTTCTTTGAGAAGAGAG 3220294
Query 22922 TTGGTGAATACCAAAAAGCAGGTGTTATGGATGCATTGAATGATAG 22967
| ||| || ||||| |||||||| |||| || | |||| |||
Sbjct 3220295 TGTCTGACTATCAAAAGGCAGGTGTCATGGCTGGTTCTAATGCTAG 3220340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353533203128
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