Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq3 111 1e-19
>seq3
Length=2773601
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||||| || || || || ||||| || || |||||||| | ||| ||||||
Sbjct 154121 ATGCAAATCTTCGTAAAGACCCTCACTGGTAAGACCATTACTCTTGAAGTTGAGTCCTCT 154180
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
|| ||| ||| | || || |||||| || || ||||| | || || ||
Sbjct 154181 GATACTATTGATAATGTTAAGACCAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 154240
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
||||||||||||| ||| || || ||||||||||||| || |||| || | ||||| |||
Sbjct 154241 CAAAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGATTACAAC 154300
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGT 115494
|||||||| || || ||| | || ||||
Sbjct 154301 ATTCAAAAGGAATCCACTCTCCACTTGGT 154329
Score = 100 bits (110), Expect = 2e-16
Identities = 158/224 (71%), Gaps = 2/224 (1%)
Strand=Plus/Plus
Query 115272 ATAAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCG 115331
|||| | || | ||||||||| || || || || ||||| || || ||||| || | |
Sbjct 153879 ATAACAACTTCACAATGCAAATCTTCGTAAAGACCCTCACTGGTAAGACCATCACTCTTG 153938
Query 115332 AAACGGAGTCCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGC 115390
| |||||| || ||| | | |||| || || || ||| || || |||||
Sbjct 153939 AGGTTGAGTCCTCTGATACTATCG-ACAATGTCAAGACCAAGATTCAAGACAAGGAAGGT 153997
Query 115391 GTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACC 115450
| || || || ||||||||||||| ||| || || ||||||||||||| || ||||
Sbjct 153998 ATTCCTCCAGACCAACAAAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGCAGAACC 154057
Query 115451 ATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGT 115494
|| | ||||| || |||||||| || |||||| | || ||||
Sbjct 154058 TTGTCTGATTACAATATTCAAAAGGAATCTACTCTTCACTTGGT 154101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425343979264480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |