Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq3 111 1e-19 >seq3 Length=2773601 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || || || || ||||| || || |||||||| | ||| |||||| Sbjct 154121 ATGCAAATCTTCGTAAAGACCCTCACTGGTAAGACCATTACTCTTGAAGTTGAGTCCTCT 154180 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | || || |||||| || || ||||| | || || || Sbjct 154181 GATACTATTGATAATGTTAAGACCAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 154240 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||||||||||||| ||| || || ||||||||||||| || |||| || | ||||| ||| Sbjct 154241 CAAAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGATTACAAC 154300 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGT 115494 |||||||| || || ||| | || |||| Sbjct 154301 ATTCAAAAGGAATCCACTCTCCACTTGGT 154329 Score = 100 bits (110), Expect = 2e-16 Identities = 158/224 (71%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 115272 ATAAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCG 115331 |||| | || | ||||||||| || || || || ||||| || || ||||| || | | Sbjct 153879 ATAACAACTTCACAATGCAAATCTTCGTAAAGACCCTCACTGGTAAGACCATCACTCTTG 153938 Query 115332 AAACGGAGTCCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGC 115390 | |||||| || ||| | | |||| || || || ||| || || ||||| Sbjct 153939 AGGTTGAGTCCTCTGATACTATCG-ACAATGTCAAGACCAAGATTCAAGACAAGGAAGGT 153997 Query 115391 GTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACC 115450 | || || || ||||||||||||| ||| || || ||||||||||||| || |||| Sbjct 153998 ATTCCTCCAGACCAACAAAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGCAGAACC 154057 Query 115451 ATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGT 115494 || | ||||| || |||||||| || |||||| | || |||| Sbjct 154058 TTGTCTGATTACAATATTCAAAAGGAATCTACTCTTCACTTGGT 154101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425343979264480