Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq2 197 2e-45
>seq2
Length=4956242
Score = 197 bits (218), Expect = 2e-45
Identities = 519/783 (66%), Gaps = 13/783 (2%)
Strand=Plus/Minus
Query 92918 AATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGA 92977
|||||||| ||||| ||||| || ||||| || |||| | | ||||||||| | |
Sbjct 3220193 AATAATCTGTCAGCAACAAACTCAATGTATTGGCACATAAGCTTGGCATTCATTCCCAAA 3220134
Query 92978 AGACGTACA-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAA 93036
|||| |||| || | ||| || |||||||| || || || || | ||||||||| | |
Sbjct 3220133 AGAC-TACATGGCAAAGCATCAGTCAAGAACTCCTTTTCAATAATAACGGCTTCAGTGAT 3220075
Query 93037 GAT---TTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCA 93093
|| ||| || || | || ||| | ||| || | | | | | || ||
Sbjct 3220074 AATCTTTTCAATAACAGACTTCTTAGGTC--TGTTG-ACAAGGTGGCCGAAAAGCAAACA 3220018
Query 93094 CGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACC 93153
||||| ||||| || | ||||| || || || ||||| || || ||| || | |||
Sbjct 3220017 AGCAAAATCGGTGTGCATGCCTTCATCACGCGAGATCAATTCGTTTGAGAACGTCAGACC 3219958
Query 93154 TGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTAT 93213
|| | ||||| || ||||| | ||| || || ||||| ||||| || || ||
Sbjct 3219957 AGGCATGAGTCCACGCTTCTTCAACCAGAAGATACTGGCAAATGATCCAGAGAAGAAGAT 3219898
Query 93214 ACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-CTGCTGA 93272
||| || ||||| ||||| || || | ||| || |||||| | | || | | || |
Sbjct 3219897 ACCCTCAACGGCAGCAAAGGCAACGAGACGCTCAGCAAAAGTGGACTGATCATCAGCA-A 3219839
Query 93273 TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAA 93332
||||| | |||||| || || || ||||||||||| || | | || ||||| | |
Sbjct 3219838 TCCATCGGAGAGCCCAGTCAGCCTTCTTCTTAATACATGGAATATTGTCAATAGCATGGA 3219779
Query 93333 ATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTT 93392
| | | | ||| | | ||| || || || || || | | || || | |
Sbjct 3219778 ACAAAAAGTTAGCCTCCTTAGCATCCTTGATATAAGTGTCAATAAGTAATGAGTAGGTCT 3219719
Query 93393 CAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCT 93452
| | ||||| |||||||| ||||||||| ||||| ||||| | || || | || |
Sbjct 3219718 CTGCATGGATGTTCTCCATCATAATTTGGAAACCGTAAAAACACTTTGCCTCGGGAATTT 3219659
Query 93453 GCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaa 93512
| ||||| ||| ||||| || || | || || ||||| |||||||| || || ||||
Sbjct 3219658 GAACTTCACCAGAGAATCTTTCAACCAAGTTCTCGTTGACGATACCATCTGAAGCAGCAA 3219599
Query 93513 aaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCAAT 93569
| || || | | | | |||||| | |||||||||| |||| | | ||||| |
Sbjct 3219598 AGAATGCAAGGACACGAGAGATAAAAAATCTCTCATCATCATTAAGACGGTGCTCCCAGT 3219539
Query 93570 CGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTT 93629
| | || ||| | ||| | |||||| ||||||| || || || || || | |
Sbjct 3219538 CACTGATGTCCTTTCCTAAATCAATTTCTTCAGCAGTCCAGAAAGAAGCCTCAGCCTGCT 3219479
Query 93630 TGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTAT 93689
||||||| | ||| || || || || | ||| || || | ||||| | |||||||| |
Sbjct 3219478 TGTACATTTGCCAAATCTCATGGTACTTAATAGGGAACAGAACAAATCTGTTAGGGTTTT 3219419
Query 93690 CTT 93692
|||
Sbjct 3219418 CTT 3219416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860772156960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |