Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq3 107 2e-18
>seq3
Length=2773601
Score = 107 bits (118), Expect = 2e-18
Identities = 351/542 (65%), Gaps = 14/542 (3%)
Strand=Plus/Plus
Query 20191 GTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATG 20250
||||| || ||||| |||| ||||||||||| || || | | ||| ||| |
Sbjct 791476 GTAGACATGAGCATCGCCCATTGTGTGAATAAAATCACCACATTCTATTCCACAAACCTT 791535
Query 20251 AGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCAT 20310
||| | ||| | ||||| | | ||| |||||| ||||| || |||||||| |||||
Sbjct 791536 AGCGATCATCTTCGTTAACAAAGCATAAGAGGCAATATTAAATGGCACTCCCAAGCCCAT 791595
Query 20311 GTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTC------AC-----CGTCAGC-TAC 20358
|| | || ||||| | |||||| |||||||| || || ||| |||
Sbjct 791596 ATCACAACTTCTTTGATATAACTGACAAGAAAGCTCTGGCTTACCATTACGGAAGCTTAC 791655
Query 20359 ATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACG-ACAAGTCCGCCGGGT 20417
|||||| ||| | || | |||||| || ||||| ||||| | || || || || || |
Sbjct 791656 ATAAAACTGAGAAAATACGTGACAAGGTGGAAGAGCCAT-ATCGTTCATATCGGCGGGAT 791714
Query 20418 TCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGT 20477
|||| || |||| || |||| ||| || | || | | || ||| | | |
Sbjct 791715 TCCATGCTGACATGATTATTCGTCTGTCATATGGTGTCTCCTTGATTTTTCGTATCACTT 791774
Query 20478 ACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCC 20537
| || ||| || | || | || | || |||| ||| ||| | || || |
Sbjct 791775 CTGCCAGTTGATCTACTCCTTTACCAGAGTAATCAGTATCGCAATCCTCATATTTGGCGC 791834
Query 20538 CAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCA 20597
|||| || ||||| |||||||| || || ||||| | ||| ||||| | |||||| | |
Sbjct 791835 CAAAATGTCTCCATTGGAAACCATACACGGGTCCAAGATCTCCCTCACGTCTGTGTTCTA 791894
Query 20598 GGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCTGTTC 20657
| || ||| | ||| ||||| | ||||| ||||| || | || ||| |
Sbjct 791895 GTCCTCGCTTGTCCAAAAACTCTCGACTTCCATTGCCATCCCAAATATGAACGCCTCTGT 791954
Query 20658 TTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACGC 20717
|||||| | || |||||| ||| || | |||||| | || |||| || || |
Sbjct 791955 CAGAAAGCAATTTCGAATCAGTAGACCCTTTGACAAACCATAATAGTTCTTCCAAGACAC 792014
Query 20718 CT 20719
||
Sbjct 792015 CT 792016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441372777931360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |