Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 113 4e-20 >seq2 Length=4956242 Score = 113 bits (124), Expect = 4e-20 Identities = 416/649 (64%), Gaps = 2/649 (0%) Strand=Plus/Plus Query 93717 TTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAG 93776 |||| ||||||| | ||||| ||| |||| | |||||| | |||||||| |||| | Sbjct 3632595 TTACAATTACTTCGGTTTCAAGACTTTGGAAAGATCGTACTTGCTCAAGATTAATGGTAA 3632654 Query 93777 GGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGA 93836 | ||||| |||| || || || | ||| | || || | || ||||| || || Sbjct 3632655 AATCGCCGAGAGACCCCAACACATGATCATGAGAGTAGCTGTTGGTATTCATGGTTCTGA 3632714 Query 93837 CATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCCA 93895 || | || | | | | || ||||| | ||| | ||| |||| || Sbjct 3632715 TATCACCAAGGCCATTGAAACATACAACTACATGTCTCAAAAGTATTTTACACATG-CCT 3632773 Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| || |||| ||| || || || || ||| || ||||| || || ||| || | | Sbjct 3632774 CCCCCACTCTGTACAATGCTGGTACTCCCAAGCCTCAAATGTCCTCTTGCTTCTTGGTTA 3632833 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | |||| ||| || || || |||| ||| | | ||| ||||| || | Sbjct 3632834 ACATGAAGGACGATTCTATAGATGGCATTTACGATACTTTGAAGACTTGTGCCTTGATTT 3632893 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075 |||| | || || || || || | ||||| || | | ||||| | || ||||||| Sbjct 3632894 CAAAGTCTGCTGGTGGTATTGGTTTGAGTGTTCATAATATCCGTGCTACTGGCTCCTACA 3632953 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 | || || || || ||||| ||||| | || || ||| | | || ||||| || Sbjct 3632954 TTGCTGGAACTAACGGTACCTCAAACGGTATTGTTCCCATGTTGAGAGTTTTCAATAATA 3633013 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195 | || | || || || ||||||||| | | | ||| |||| || | || | | Sbjct 3633014 CTGCTAGATATGTTGATCAGGGTGGTAATAAGCGACCAGGTGCTTTTGCCATGTACTTGG 3633073 Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255 |||| ||||| | || || | ||||| || ||||||||||| ||||| || || Sbjct 3633074 AGCCTTGGCATGATGATGTTTTTGAATTCATTGAGCTGCGAAAGAATCACGGTAAGGAAG 3633133 Query 94256 TGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCG 94315 | | |||||||| | |||| ||||| ||| | || ||| | || ||||| | | Sbjct 3633134 AAGTCCGTGCCAGAGATTTGTTCTTGGCTCTATGGATTCCTGACTTGTTCATGAAGAGAG 3633193 Query 94316 TCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGG 94364 || || ||| | |||| | | | ||||||||||| ||||| || Sbjct 3633194 TCAAGGCTAACGAGGATTGGACTTTGATGTGTCCCAATGAGTGTCCTGG 3633242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723175263840