Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq2 113 4e-20
>seq2
Length=4956242
Score = 113 bits (124), Expect = 4e-20
Identities = 416/649 (64%), Gaps = 2/649 (0%)
Strand=Plus/Plus
Query 93717 TTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAG 93776
|||| ||||||| | ||||| ||| |||| | |||||| | |||||||| |||| |
Sbjct 3632595 TTACAATTACTTCGGTTTCAAGACTTTGGAAAGATCGTACTTGCTCAAGATTAATGGTAA 3632654
Query 93777 GGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGA 93836
| ||||| |||| || || || | ||| | || || | || ||||| || ||
Sbjct 3632655 AATCGCCGAGAGACCCCAACACATGATCATGAGAGTAGCTGTTGGTATTCATGGTTCTGA 3632714
Query 93837 CATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCCA 93895
|| | || | | | | || ||||| | ||| | ||| |||| ||
Sbjct 3632715 TATCACCAAGGCCATTGAAACATACAACTACATGTCTCAAAAGTATTTTACACATG-CCT 3632773
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955
|||| || |||| ||| || || || || ||| || ||||| || || ||| || | |
Sbjct 3632774 CCCCCACTCTGTACAATGCTGGTACTCCCAAGCCTCAAATGTCCTCTTGCTTCTTGGTTA 3632833
Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015
| |||| ||| || || || |||| ||| | | ||| ||||| || |
Sbjct 3632834 ACATGAAGGACGATTCTATAGATGGCATTTACGATACTTTGAAGACTTGTGCCTTGATTT 3632893
Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075
|||| | || || || || || | ||||| || | | ||||| | || |||||||
Sbjct 3632894 CAAAGTCTGCTGGTGGTATTGGTTTGAGTGTTCATAATATCCGTGCTACTGGCTCCTACA 3632953
Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135
| || || || || ||||| ||||| | || || ||| | | || ||||| ||
Sbjct 3632954 TTGCTGGAACTAACGGTACCTCAAACGGTATTGTTCCCATGTTGAGAGTTTTCAATAATA 3633013
Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195
| || | || || || ||||||||| | | | ||| |||| || | || | |
Sbjct 3633014 CTGCTAGATATGTTGATCAGGGTGGTAATAAGCGACCAGGTGCTTTTGCCATGTACTTGG 3633073
Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255
|||| ||||| | || || | ||||| || ||||||||||| ||||| || ||
Sbjct 3633074 AGCCTTGGCATGATGATGTTTTTGAATTCATTGAGCTGCGAAAGAATCACGGTAAGGAAG 3633133
Query 94256 TGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCG 94315
| | |||||||| | |||| ||||| ||| | || ||| | || ||||| | |
Sbjct 3633134 AAGTCCGTGCCAGAGATTTGTTCTTGGCTCTATGGATTCCTGACTTGTTCATGAAGAGAG 3633193
Query 94316 TCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGG 94364
|| || ||| | |||| | | | ||||||||||| ||||| ||
Sbjct 3633194 TCAAGGCTAACGAGGATTGGACTTTGATGTGTCCCAATGAGTGTCCTGG 3633242
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494723175263840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |