Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_011588.1
Length=127615
Score E
Sequences producing significant alignments: (Bits) Value
seq3 82.4 6e-11
>seq3
Length=2773601
Score = 82.4 bits (90), Expect = 6e-11
Identities = 189/278 (68%), Gaps = 5/278 (2%)
Strand=Plus/Plus
Query 7576 GTGACATGGAGGAAGAGCCATTTTGTCCAAGTCTACCGGATTCCACGCGCTCATTATAAT 7635
|||||| || ||||||||||| | || || || | |||||||| || ||| || ||
Sbjct 791674 GTGACAAGGTGGAAGAGCCATATCGTTCATATCGGCGGGATTCCATGCTGACATGATTAT 791733
Query 7636 GCGAC-GACTTGTAGGGTCCTCTTTGATGGTGCGAATCACTTGTTGCAATTGGTCGACCC 7694
|| | | | | | | ||| || ||||| | || ||||||| | || ||| || || |
Sbjct 791734 TCGTCTGTCATATGGTGTC-TCCTTGATTTTTCGTATCACTTCTGCCAGTTGATCTACTC 791792
Query 7695 CTTTATTCGTATAGTCCGTGTTACAATCAACGTACGATGCGCCAAAATGCCTCCATTGAA 7754
||||| | || || || | ||||| | || ||||||||||| |||||||| |
Sbjct 791793 CTTTACCAGAGTAATCAGTATCGCAATCCTCATATTTGGCGCCAAAATGTCTCCATTGGA 791852
Query 7755 AACCGTAAATCGGACCTAAGCTTTCGTACTCGGTATAGTCGTATAATCCACGACTATCCA 7814
|||| || | ||| | ||| | || | | || | || | || ||| || | ||||
Sbjct 791853 AACCATACA-CGGGTCCAAGATCTCCCTCAC-GTCT-GTGTTCTAGTCCTCGCTTGTCCA 791909
Query 7815 GATACTCTCGACTCGAGTTACCCTTCCATATATGAACG 7852
| |||||||||| || || | ||| |||||||||
Sbjct 791910 AAAACTCTCGACTTCCATTGCCATCCCAAATATGAACG 791947
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408243180098144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |