Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq3 82.4 6e-11 >seq3 Length=2773601 Score = 82.4 bits (90), Expect = 6e-11 Identities = 189/278 (68%), Gaps = 5/278 (2%) Strand=Plus/Plus Query 7576 GTGACATGGAGGAAGAGCCATTTTGTCCAAGTCTACCGGATTCCACGCGCTCATTATAAT 7635 |||||| || ||||||||||| | || || || | |||||||| || ||| || || Sbjct 791674 GTGACAAGGTGGAAGAGCCATATCGTTCATATCGGCGGGATTCCATGCTGACATGATTAT 791733 Query 7636 GCGAC-GACTTGTAGGGTCCTCTTTGATGGTGCGAATCACTTGTTGCAATTGGTCGACCC 7694 || | | | | | | ||| || ||||| | || ||||||| | || ||| || || | Sbjct 791734 TCGTCTGTCATATGGTGTC-TCCTTGATTTTTCGTATCACTTCTGCCAGTTGATCTACTC 791792 Query 7695 CTTTATTCGTATAGTCCGTGTTACAATCAACGTACGATGCGCCAAAATGCCTCCATTGAA 7754 ||||| | || || || | ||||| | || ||||||||||| |||||||| | Sbjct 791793 CTTTACCAGAGTAATCAGTATCGCAATCCTCATATTTGGCGCCAAAATGTCTCCATTGGA 791852 Query 7755 AACCGTAAATCGGACCTAAGCTTTCGTACTCGGTATAGTCGTATAATCCACGACTATCCA 7814 |||| || | ||| | ||| | || | | || | || | || ||| || | |||| Sbjct 791853 AACCATACA-CGGGTCCAAGATCTCCCTCAC-GTCT-GTGTTCTAGTCCTCGCTTGTCCA 791909 Query 7815 GATACTCTCGACTCGAGTTACCCTTCCATATATGAACG 7852 | |||||||||| || || | ||| ||||||||| Sbjct 791910 AAAACTCTCGACTTCCATTGCCATCCCAAATATGAACG 791947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408243180098144